Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5859 140 5e-27 >seq5859 Length=97331 Score = 140 bits (154), Expect = 5e-27 Identities = 236/335 (70%), Gaps = 19/335 (6%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || ||||||||||| | ||||| |||| | ||| |||||||| || ||||| Sbjct 76180 ACCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTT 76121 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||| ||||||| ||| || |||||||||||||| ||||| ||||| || Sbjct 76120 CTTCAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAA 76061 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCATCGC 794516 | | || | ||| || | || |||| | | ||||| | |||||| || || Sbjct 76060 GGCCACCAACCGTTCACCGAA--TGTCGA----ATGTTTGTCGGATATCCACCGCAGGGC 76007 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCT 794575 ||| || |||||| | | | |||| | || ||||||||| ||||| || | | Sbjct 76006 CCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAA-AGAT----AT 75952 Query 794576 TCTCG-ACCGGG---TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGG 794631 ||||| ||| | || |||| ||| ||||||||||| || ||||||||||| ||||| Sbjct 75951 TCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGA 75892 Query 794632 ATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||||| || || ||||| || || || || Sbjct 75891 ATGTTTTCCATCATAATTTGGAAACCGTAGAAACA 75857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7906791403520076