Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq14965 120 2e-22 seq9834 102 5e-17 seq68235 91.5 1e-13 seq3995 91.5 1e-13 >seq14965 Length=33111 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||| |||||||| |||||||| || || ||| ||||| | || |||| | Sbjct 7844 AGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAAT 7903 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || ||||| || || ||||||||||| | || | ||||||||||| | || Sbjct 7904 TGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATC 7963 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || ||||| | |||| || | ||| || || | || || ||||| ||| Sbjct 7964 TTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCC 8023 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||| ||||| |||||||| Sbjct 8024 GTCAAGGTCTTCACAAAAATCTGCAT 8049 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || ||||| |||| ||| |||||||||||| |||||||| || || | || |||| Sbjct 8294 AGAACCAGATGAAGGGTCGACTCCTTCTGAATATTATAGTCGGACAGCGTACGACCATCC 8353 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || |||||||| || |||||||| || ||||| ||||| Sbjct 8354 TCTAGTTGCTTGCCAGCGAAGATTAGACGTTGTTGGTC 8391 >seq9834 Length=29888 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 || || |||| ||| ||||||||| ||||| || || || || |||| |||| || Sbjct 161 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCA 220 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| |||| |||||||| || | || | || |||||||| | Sbjct 221 AGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGG 280 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | || | |||||| |||| ||| ||||||||| Sbjct 281 ATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTT 340 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || ||||| || ||||| ||||| Sbjct 341 CCTGTCAGCGTCTTGACGAAGATTTGCAT 369 >seq68235 Length=344 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| ||| ||||||||||||||||||||| || || |||| | || || ||| Sbjct 123 AGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGAGT 64 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || ||||||| || |||||||| |||| | ||||||||||| Sbjct 63 TGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 11 >seq3995 Length=12643 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||||| |||||||||||||| |||||||| ||||| || | || | || || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 | ||||| || || ||||||| || |||||||| |||| | ||||||||||| Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325339985539196