Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq14965 107 1e-18 seq68235 93.3 3e-14 seq3995 82.4 6e-11 >seq14965 Length=33111 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 29595 TTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATA 29654 ||| || || ||||||||||| | || |||||| || || | ||| || ||||| | Sbjct 7858 TTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAA 7917 Query 29655 TATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAG 29713 || | | |||||| || || ||||||||||| |||||||| ||| || | |||||| Sbjct 7918 AATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTG-AATCTTCGCCTTGACAT 7976 Query 29714 TTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAA 29773 | || | ||||| ||| ||||| || | || ||||| || || || ||||| || | Sbjct 7977 TGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCA 8036 Query 29774 CAAATATCTGCAT 29786 |||| |||||||| Sbjct 8037 CAAAAATCTGCAT 8049 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || || | ||| || || ||||| || || || || || || | || |||||| Sbjct 8063 CGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAAAGGGTGCGCCCG 8122 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | ||| || || ||| | ||||| | ||||||||||| || ||||| || || Sbjct 8123 TCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGGATACCTTCCTTA 8182 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||| || | || | ||||| || ||| ||||| || || ||| Sbjct 8183 TCCTGGATCTTCGCTTTAACGTTGTCGATGGTGTCTGATGATTCCACTTCGAGGGTGATA 8242 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || |||||||| Sbjct 8243 GTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 >seq68235 Length=344 Score = 93.3 bits (102), Expect = 3e-14 Identities = 99/128 (77%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 29578 ACCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||||| |||||| ||||| || || ||||||||||| || | || |||||| || || Sbjct 127 ACCAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTC 68 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 |||||| || |||||| | ||||| | ||||| || ||||| || ||||| ||||| || Sbjct 67 GAGTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 8 Query 29697 TAATTTTT 29704 ||| ||| Sbjct 7 -AATCTTT 1 >seq3995 Length=12643 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/127 (75%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 29579 CCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGA 29638 |||| ||||| ||| || || || ||||||||||||| || || ||| || |||| Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTA 29698 | || || |||||| | ||||| | ||||| || ||||| || ||||| ||||| || | Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG-A 12 Query 29699 ATTTTTG 29705 || |||| Sbjct 11 ATCTTTG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384801902152644