Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq7114 145 6e-29 seq19664 91.5 1e-12 >seq7114 Length=50987 Score = 145 bits (160), Expect = 6e-29 Identities = 261/379 (69%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 |||||||| |||||||| || ||||| ||||| | ||||| || | ||||| | ||| Sbjct 11266 ACAAGACGGTTATCAAAGTCCTCACCGCCCAAGTGAGTATCACCAGCAGTAGCCTTGACT 11207 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||||| | || || | ||||||| || || || || | |||| Sbjct 11206 TCGAATATACCCTCTTCAATCGTCAGGAGGGAAACATCAAAAGTACCTCCTCCAAGATCA 11147 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || |||||||| || ||| | ||||| || ||||| ||||| | || ||| Sbjct 11146 AAGATAAGTACGTTGCGTTCGCCAACAACCTTTTTGTCGAGACCGTACGCGATGGCGGCA 11087 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 ||||| || || || || || | | || || | ||||| ||| | || || || || Sbjct 11086 GCAGTAGGCTCGTTGATGATACGAAGGACGTTCATACCAGAAATCGTACCAGCGTCCTTG 11027 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480 ||||| || | |||||||||||| ||||| ||||| || || | || || | |||| || Sbjct 11026 GTGGCCTGACGTTGTGAATCGTTGAAATAAGCAGGGACGGTGACGACAGCGT-TGTTGAC 10968 Query 282481 TTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 | || || | ||||| || || | ||||| || |||| ||| || ||||| Sbjct 10967 GTTATTGCCGAGGTAAGCCTCAGCAGTCTCCTTCATCTTCAACAAAACCATAGACGAAAT 10908 Query 282541 TTGTTCTGGAGAATATTGC 282559 | ||| ||||| ||| || Sbjct 10907 CTCTTCAGGAGACTATAGC 10889 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 282698 GTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 282757 |||||| ||||| | || | |||| || || ||||| || || ||| |||| | Sbjct 10641 GTATTGTGAGGATTCATGGCGACCTGATTCTTTGCGGCATCGCCGATGAGACGTTCATTA 10582 Query 282758 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 282817 |||| || || |||||||| || || || |||||||| || || || || || || ||| Sbjct 10581 TCTGAGAAAGAGACATATGAAGGGGTGGTTCGATTACCCTGGTCGTTGGCGATGATCTCA 10522 Query 282818 ACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853 || | |||| ||||||||||||||||| ||| || Sbjct 10521 ACACGATCATTCTGCCATACACCTACACATCTACAA 10486 >seq19664 Length=17166 Score = 91.5 bits (100), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 |||||||||||| || | || || || || ||||||||||| | | | ||||| || Sbjct 6508 ATCAAGACCATAAGCCAGGGCCGCTGCCGTGGGTTCATTAATCACCCGGAGAACATCTAG 6567 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 ||||||||| || ||||| ||||| ||||| | || | ||| || || || ||||| Sbjct 6568 TCCAGCAATTTGACCAGCATCCTTAGTTGCTTGGCGCTGGGCATCATTGAAGTAAGCAGG 6627 Query 282457 AACAGTAATAACGGC 282471 |||||| ||||| || Sbjct 6628 AACAGTGATAACAGC 6642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3736266571223784