Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq9834 114 1e-20 seq14965 84.2 2e-11 >seq9834 Length=29888 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || |||||||| | ||| ||| | || || |||| Sbjct 166 ATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCA-TCTTCAAGCT 224 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| ||| |||| | || ||||| |||||||| || ||||||||||| ||||| Sbjct 225 GCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGGATCT 284 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| ||||| | | ||| || || | ||||| ||| || || | Sbjct 285 TGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTTCCTG 344 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || ||||| || ||||| Sbjct 345 TCAGCGTCTTGACGAAGATTTGCAT 369 >seq14965 Length=33111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| ||||||| || ||||||||||| || || || |||||||| ||| Sbjct 7904 TGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATC 7963 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | |||| |||||| | | ||| || || | |||| || || || Sbjct 7964 TTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCC 8023 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || ||||||||||| Sbjct 8024 GTCAAGGTCTTCACAAAAATCTGCAT 8049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482883695320160