Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5859 176 6e-38 >seq5859 Length=97331 Score = 176 bits (194), Expect = 6e-38 Identities = 381/552 (69%), Gaps = 35/552 (6%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| ||||||| |||||||| ||||| || |||||||||||||| ||| | || | Sbjct 75643 GATATGGCAAATGTAT-AAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATC 75701 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTC 1455887 | | || || | ||||| || || | |||| |||| || |||||| Sbjct 75702 TTTCCAAGGATCTACATG----ACTGGCACAACCGTCTCAACGACAACGAACGTCATTTC 75757 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| || || ||||| || || ||| || ||||| || || |||||||| Sbjct 75758 ATCTCTCATGTTCTCGCGTTCTT-CGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCT 75816 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | | ||| || || |||||| | | || || |||| || ||||| ||||| || Sbjct 75817 TGAGAGGTTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAAT 75876 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || |||||||| ||||| || |||||||| || || |||||||| ||| |||| || Sbjct 75877 TATGATGGAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGA 75936 Query 1456068 ---CCCGGT-CGAGAAGGACCACCTCTTTCG-CGCCATCGACACGGTGCCGTCGGTGAGG 1456122 | ||| |||||| | || ||||| ||||||||| || | || | | | | Sbjct 75937 TGCCACGGAACGAGAAT----ATCT-TTTCGACGCCATCGAGACCATTCCCTGTATAAAG 75991 Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCG 1456179 |||||| |||||||| || |||||| | |||| | |||||| || | | Sbjct 75992 CGAAAGGCTGACTGGGCCCTGCGGTGGATATCCGACAAACAT----TCGACA-TTCGGTG 76046 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CC 1456237 | ||| | || | ||| ||||| ||||| |||||||||||||| || ||| ||| || Sbjct 76047 AACGGTTGGTGGCCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTC-GCGTCC 76105 Query 1456238 ATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTAT 1456297 ||||| ||| | |||||||| || |||||||| || ||| |||| ||||| |||| Sbjct 76106 ATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCTGG-CTTGACCTTTTCAAACGAGCTTAT 76164 Query 1456298 CAGTCGCGACGA 1456309 ||||||||| || Sbjct 76165 CAGTCGCGATGA 76176 Score = 91.5 bits (100), Expect = 2e-12 Identities = 250/374 (67%), Gaps = 13/374 (3%) Strand=Plus/Minus Query 1455905 CTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAG 1455964 |||||||||| || ||||||||| || || ||||| | | ||| | | | Sbjct 74540 CTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTTATTGAAAGATTTTCGCAGG 74481 Query 1455965 AGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCC 1456024 | || ||| | |||| || |||| || || || || || || ||||||||||| | Sbjct 74480 AAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAAGTCATGATCGAAAACATAC 74421 Query 1456025 ACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAA-GGAC 1456083 | || ||||| || || | || || || || |||||||| || || || || |||| Sbjct 74420 ATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAAGATCC--TCATCAACGGAC 74363 Query 1456084 -CACCTCTTTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGA 1456141 ||||| ||||| || || || || | || | || | | | || ||||||||||| Sbjct 74362 TCACCT-TTTCGAGGCAATTGAAACCATCCCTTGTGTCAAGCACAAAGCCGACTGGGCTC 74304 Query 1456142 TGAAGTGGATCAACAAGGA--GGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCC 1456199 | || ||||| | | || | | || ||||| ||||| ||| | | ||||| Sbjct 74303 TTAAATGGATTGCCGACGAACAGTCATC----TTTTGCGGAGCGCCTCATAGCATTTGCT 74248 Query 1456200 GC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGC 1456258 || || || ||||| |||||||| || ||| || || |||||| | ||||| || Sbjct 74247 GCAGTTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTTTGGTTGAAGAAACGA 74188 Query 1456259 GGCCTCATGCCCGG 1456272 || |||||||| || Sbjct 74187 GGACTCATGCCTGG 74174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7169238174831208