Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq5859 174 2e-38 >seq5859 Length=97331 Score = 174 bits (192), Expect = 2e-38 Identities = 380/566 (67%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| ||||| ||||| || || | |||||||| | ||| || | ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | |||||||| ||||||||||| || | ||| || |||| || || |||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || || ||||||||||| || || || || || || | | || ||| | | | || Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 39788 TTAT---GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || | ||||||| | | ||||| ||||| || ||||| ||| || || || || Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || || | || ||||| | | ||| |||||| | || || || || | || Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 || | || || || |||||||| ||| || || || ||||| ||||| | ||| Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 || | || ||| || || |||| || || | || ||||| ||||| |||||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCA-AT 40081 || || || || || | ||||| || |||| ||| | | | || | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGG 75730 Query 40082 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCC 40141 || | |||||||| | ||| || || | ||| | ||||| || ||||||||||| ||| Sbjct 75729 TTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCC 75670 Query 40142 TCTGCCTTTTTGTACATGTTCCATAT 40167 ||||||||||| ||||| | |||||| Sbjct 75669 TCTGCCTTTTTATACATTTGCCATAT 75644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686145609977760