Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5859 208 6e-49 >seq5859 Length=97331 Score = 208 bits (230), Expect = 6e-49 Identities = 391/570 (69%), Gaps = 30/570 (5%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGA--TT 43787 || ||||| ||||||| |||||| |||| ||||||||||| ||||||||| | || || Sbjct 74670 ATTTGGCAGCTGTACAAGAAAGCAGAGGCATCATTTTGGACCGCAGAAGAATTGGACCTT 74611 Query 43788 TGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC---AA----GAAAAAC---AT 43837 | || | | | ||| ||| || | |||| || || || ||| || Sbjct 74610 TCACA------TGATCTCAT-GGACTGGA--AAAATCAGCTAAACGCTGACGAACGTTAT 74560 Query 43838 TTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTG 43897 ||||| ||| || | || ||||| || ||| ||| || || ||||||||||| | Sbjct 74559 TTTATCTCTCATATTCTTGCTTTTTTCGCGGCGTCCGATGGCATTGTCAATGAAAACCTT 74500 Query 43898 GTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAA 43957 || | ||| |||| ||||||||| | ||||||| || || || ||||| |||||| Sbjct 74499 ATTGAAAGATTTTCGCAGGAAGTTCAAGTCGCAGAAGCCCGTTGCTTCTATGGATTTCAA 74440 Query 43958 ATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAA 44017 | || ||||| || |||||||||| || | | || || ||||| ||| ||||| Sbjct 74439 GTCATGATCGAAAACATACATTCGGAAACTTATTCTTTGCTTATTGATACATACGTCAAA 74380 Query 44018 GATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACAT 44077 ||| || | | || | || | || || ||||| | ||| | || || Sbjct 74379 GATCCTCATCAACGGACTCACCTTTTCGAGGCAATTGAAACCATCCCTTGTGTCAAGCAC 74320 Query 44078 AAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGAT------TCTTTTGGAGAACGA 44131 ||||| |||||||| ||||||||||| | | | || ||||||| || || Sbjct 74319 AAAGCCGACTGGGCTCTTAAATGGAT---TGCCGACGAACAGTCATCTTTTGCGGAGCGC 74263 Query 44132 CTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTT 44191 || | || ||||| | || |||||||| || || || ||||| || || || |||||| Sbjct 74262 CTCATAGCATTTGCTGCAGTTGAAGGCATATTTTTCTCCGGATCATTCGCAGCTATATTT 74203 Query 44192 TGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGT 44251 ||||| ||||||||||| | |||||||| ||||| || || |||||| | || |||||| Sbjct 74202 TGGTTGAAGAAACGAGGACTCATGCCTGGCTTGACATTCTCTAATGAGCTTATTAGTCGT 74143 Query 44252 GATGAAGGCTTACATTGCGATTTTGCTTGC 44281 ||||| ||| | || ||||||| ||| Sbjct 74142 GATGAGGGCATGCACACAAATTTTGCGTGC 74113 Score = 188 bits (208), Expect = 6e-43 Identities = 389/570 (68%), Gaps = 24/570 (4%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 |||||||||||||| ||||| ||| |||| || |||||||| || ||||| | ||| | Sbjct 75644 ATATGGCAAATGTATAAAAAGGCAGAGGCTTCGTTTTGGACCGCCGAAGAGATGGATCTT 75703 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAA------AACCACAA-GAAAAACATTTTAT 43842 | || || || ||| | | ||| | ||| |||| ||| ||||| || Sbjct 75704 TCCAAGGATCTA---CAT-GACTGGCACAACCGTCTCAACGACAACGAACGTCATTTCAT 75759 Query 43843 ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAG 43902 ||| ||| | ||||| || || ||| || |||||||| ||||| || | || Sbjct 75760 CTCTCATGTTCTCGCGTTCTTCGCAGCGTCTGATGGGATAGTTAATGAGAACCTCCTTGA 75819 Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 ||||| | | ||||| ||| | | ||||| || ||||| || || || |||||| Sbjct 75820 GAGGTTTTCAAACGAAGTCCAAGTTGCGGAAGCGCGTTGTTTCTACGGTTTCCAAATTAT 75879 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG- 44021 || ||||| ||||| || || | ||| || || || || || ||||||||||||| Sbjct 75880 GATGGAAAACATTCACTCCGAGACCTACTCCCTACTCATCGACACTTACATCAAAGATGC 75939 Query 44022 ---GGCACGAGAAGCATCGATTGTTTAATGCGATAGA-AACAGTACCTGCGATTAAACAT 44077 || ||||||| ||| | || | || || || | || | |||| || || | Sbjct 75940 CACGGAACGAGAA-TATC---TTTTCGACGCCATCGAGACCATTCCCTG-TATAAAGCGA 75994 Query 44078 AAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATT---CTTTTGGAGAACGACTT 44134 || || ||||||||||| |||||| || ||| | || || ||||| | Sbjct 75995 AAGGCTGACTGGGCCCTGCGGTGGATATCCGACAAACATTCGACATTCGGTGAACGGTTG 76054 Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || || || | ||| |||||||| || || || ||||| || ||| |||| || ||| Sbjct 76055 GTGGCCTTCGCCGCTGTCGAAGGCATCTTTTTCTCTGGATCATTCGCGTCCATCTTCTGG 76114 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 || ||||| || ||| | |||||||| ||||| |||||||| ||| | || ||||| ||| Sbjct 76115 TTGAAGAAGCGTGGTCTCATGCCTGGCTTGACCTTTTCAAACGAGCTTATCAGTCGCGAT 76174 Query 44255 GAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || | || ||||| || |||||| Sbjct 76175 GAGGGTATGCACACAGATTTCGCGTGCTTG 76204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397025446348420