Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5859 93.3 5e-14 >seq5859 Length=97331 Score = 93.3 bits (102), Expect = 5e-14 Identities = 273/417 (65%), Gaps = 8/417 (2%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| || |||||| ||||| ||||| | || |||||||| || || ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 ||||||||| | ||||| |||||| |||||||| || || || || || ||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCAT---CAAACCATTTCATTGCCCAT 122853 || | ||||| || || || || |||| | | | ||| |||||| | ||||| Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGA---TGACTGTTCGTCGGCAATCCATTTAAGAGCCCAG 74311 Query 122854 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCA 122913 | || || | || | ||| || | |||| || || || || | || || || | Sbjct 74312 TCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGA 74371 Query 122914 GATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTTC- 122972 ||| || | |||| | ||||| | ||||| ||||| ||| | |||| Sbjct 74372 TGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTCG 74431 Query 122973 ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAAA 123032 || ||| | |||| || | ||||| | || ||||| | ||||| || | || ||| Sbjct 74432 ATCATGAC-TTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAA 74490 Query 123033 ATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGAT 123089 | | | | | || ||| ||||| ||||||||| | || || || || || || Sbjct 74491 TCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAAT 74547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627334225046400