Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5859 132 6e-26 >seq5859 Length=97331 Score = 132 bits (146), Expect = 6e-26 Identities = 341/511 (67%), Gaps = 9/511 (2%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | |||||| || || ||| || || || || ||| || || ||||||||||| Sbjct 76186 GTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACC 76127 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 ||||||||||||||||| || | ||||| |||||||| ||||| || || ||| Sbjct 76126 ACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGC 76067 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCG 130205 ||||| || | | || ||| | || | || ||||| | | |||| || | Sbjct 76066 GGCGAAGGCCACCAACCGTTCACCGAATG-TCGAATGTTTGTCGGATATCCACCGCAGGG 76008 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 130265 |||| | |||||| || ||||| || | ||||| ||| || || || || | |||| Sbjct 76007 CCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGAT-ATTCT 75949 Query 130266 -TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACC 130324 ||| | | |||||||||||| | || |||||| || || || ||| || | Sbjct 75948 CGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATG 75889 Query 130325 ATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATC 130383 ||| ||| || || || |||||||| | |||||||| | || || || | Sbjct 75888 TTTTCCATCATAATTTGGAAAC-CGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTT 75830 Query 130384 TGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 130443 || ||| | | | || |||||| ||| || ||||| ||| | || || ||||| || Sbjct 75829 TGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAG 75770 Query 130444 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 130500 | || ||||| | |||| || ||||| | || | | |||||| | ||||| Sbjct 75769 AACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATC 75710 Query 130501 CTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||| || ||||| | ||| || || |||||| Sbjct 75709 CTTGGAAAGATCCATCTCTTCGGCGGTCCAA 75679 Score = 89.7 bits (98), Expect = 6e-13 Identities = 280/422 (66%), Gaps = 14/422 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| ||||| || || ||||| ||||| || || |||||||| || || ||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 |||||||| || || || ||||| || ||||| || || || || || || || Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGAC--TTTGT-ATCAAACCACTTCATCGCCCAC 130210 || | ||| ||||| ||||| || ||| || || ||| ||| || | ||||| Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGA---TGACTGTTCGTCGGCAATCCATTTAAGAGCCCAG 74311 Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC-AAAGAGTTCCTTCTTTTC 130269 | || || | || || ||| |||| ||| | || || || ||| || | | || Sbjct 74312 TCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGA 74371 Query 130270 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTTC 130329 ||| |||||||||| ||| |||| || || ||||| ||||| ||| | |||| Sbjct 74372 TGA-GGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTC 74430 Query 130330 -ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGC-A 130387 || ||| | ||| | | ||||| | || ||||| | || || || |||| | Sbjct 74431 GATCATGAC-TTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTC--CTGCGA 74487 Query 130388 AAAT-TGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGAT 130446 |||| | | | | | || ||| ||||| ||||||||| | || ||||| || || || Sbjct 74488 AAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAAT 74547 Query 130447 AT 130448 || Sbjct 74548 AT 74549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617748087571040