Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4769 91.5 2e-13 >seq4769 Length=19565 Score = 91.5 bits (100), Expect = 2e-13 Identities = 275/422 (65%), Gaps = 12/422 (3%) Strand=Plus/Plus Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 ||||||||||| | ||| ||||||| || ||||| || || || ||| | || | Sbjct 7355 AATCAAAAGAACCTCGGTACGATCAAGTCCTCGAATCTTTGCACCGAGATCATCGAGTAC 7414 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 105085 | || ||||| ||||| || ||||| || || |||||||| |||| | | Sbjct 7415 TCCTCGCCGGAAGAGACCGCTGTTTGCAACCTTGCTTCGATCGCTCTTCCCACTTTCATC 7474 Query 105086 GATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145 |||| | |||| || |||| ||| || || || ||||| || ||| | Sbjct 7475 A--CCAGCGGCAAATAC----GATTTCCAAAGGCTTCATGACGTTACCAAGGTTGTTGCG 7528 Query 105146 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAA 105202 ||||| || | | || || | |||| ||||||||| ||| || || | Sbjct 7529 TTCAACCTCAATCGCATCATCGACATCAATTATTACCCCGTCCCTGAA---GCCCGACGA 7585 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 ||||| ||| | ||||||| |||||| ||||||| ||||||||||| || ||||| Sbjct 7586 TCTAACATGCGCAACCGTCCCATTGGTATCGGTGTGCAGGGTCTCGCTGACACCTTCATG 7645 Query 105263 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 | || |||| |||||| | |||||| | |||| | || ||||| Sbjct 7646 GCTCTACGGATGCCATTCGATTCCCCAGTGGCGAAGCAGCTCAACATTCAGATCTTTGAA 7705 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382 ||||| || || || || || ||||| ||| | ||| ||||||| || ||||| || Sbjct 7706 ACCATCTACCATGCTGCACTCGAGGCTAGTGCTGAGATGGCAGAAAAAGACGGTCCGTAC 7765 Query 105383 GA 105384 || Sbjct 7766 GA 7767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582612768088160