Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq7114 168 2e-36 seq14965 150 5e-31 seq9834 150 5e-31 seq19664 100 9e-16 seq68235 98.7 3e-15 >seq7114 Length=50987 Score = 168 bits (186), Expect = 2e-36 Identities = 278/400 (70%), Gaps = 1/400 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||| ||||| || |||||||| | || |||||||| | |||||| || || | Sbjct 10899 CCTGAAGAGATTTCGTCTATGGTTTTGTTGAAGATGAAGGAGACTGCTGAGGCTTACCTC 10958 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || | | ||||| | || || || || ||||| || ||| | || ||| Sbjct 10959 GGCAATAACGTCAACAACGCTGTCGTCACCGTCCCTGCTTATTTCAACGATTCACAACGT 11018 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || || ||||| | ||| | || | || || || | || || || || Sbjct 11019 CAGGCCACCAAGGACGCTGGTACGATTTCTGGTATGAACGTCCTTCGTATCATCAACGAG 11078 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || |||||||| || || || || || || || |||| | || ||| || | Sbjct 11079 CCTACTGCTGCCGCCATCGCGTACGGTCTCGACAAAAAGGTTGTTGGCGAACGCAACGTA 11138 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 ||||| |||||| | || || |||||||||||||| || || || || |||||||||| Sbjct 11139 CTTATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCCCTCCTGACGATTGAAGAGGGT 11198 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || ||||| || || |||||||||||||| || | || || || || |||||||| Sbjct 11199 ATATTCGAAGTCAAGGCTACTGCTGGTGATACTCACTTGGGCGGTGAGGACTTTGATAAC 11258 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931 ||||| || ||||| || | || ||||| || |||| Sbjct 11259 CGTCTTGTCAACCATTTCGTCCAGGAGTTTAAACG-CAAG 11297 Score = 140 bits (154), Expect = 1e-27 Identities = 264/386 (68%), Gaps = 2/386 (1%) Strand=Plus/Plus Query 349952 AATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCA 350011 || ||| | || |||| || || | ||||| || || ||||| |||||| || | || Sbjct 11370 AACCCTCGTGCTGTGCGACGTCTTCGCACTGCTTGCGAGCGTGCCAAGCGTACCCTTTCT 11429 Query 350012 TCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCA 350071 || | |||||||||| || || || || || || ||| |||| || |||| | || Sbjct 11430 TCCGCCGCCCAAACCTCCATCGAGATCGACTCCCTCTATGAGGGCATCGACTTCTATACA 11489 Query 350072 TCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGAT 350131 || |||| || ||||| || || ||||||||| |||||| || | | ||| | || Sbjct 11490 TCCCTTACTCGAGCTCGTTTCGAGGAATTATGTCAGGATCTCTTCCGTGGTACACTCGAG 11549 Query 350132 CCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTT 350191 ||||| || ||||| || ||| | || || ||| | | | ||||| | ||| Sbjct 11550 CCTGTCGAGAAAGTCTTGCGCGATTCTAAGATCGACAAGTCTAACGTGCATGAAATCGTT 11609 Query 350192 TTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAAT 350251 || || || ||||| || |||||||| || || || | || || || || ||| Sbjct 11610 TTGGTCGGCGGTTCCACCCGTATTCCTCGTATTGTTAAGCTAGTGTCCGACTTCTTCAAT 11669 Query 350252 GGCAAAGAACCTT-CTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGT 350310 || ||||| || | ||| || | || || || ||||||||||| ||||| ||||| || Sbjct 11670 GGTAAAGAGCCCAACAAGAGCA-TCAACCCTGACGAAGCTGTTGCGTATGGCGCTGCGGT 11728 Query 350311 TCAGGCATCTATTTTATCTGGAAATA 350336 ||||| | ||| | || ||| ||| Sbjct 11729 CCAGGCTGCCATTCTTTCCGGAGATA 11754 Score = 98.7 bits (108), Expect = 3e-15 Identities = 174/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 350396 GAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAA 350455 |||||| | |||| || ||||||| | || | |||| ||||| ||||| ||| Sbjct 11867 GAAACTGCCGGTGGTGTGATGACTGCCTTGATCAAGCGTAATACCACTGTTCCTACCAAA 11926 Query 350456 AAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTT 350515 ||||| | | ||||| |||| | || |||||||| | || |||||||| | Sbjct 11927 AAGTCGGAGATCTTTTCGACATACTCTGACAATCAGCCCGGCGTGCTTATTCAAGTTTAC 11986 Query 350516 GAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAA 350575 || ||||| || || ||||| | || || || |||||| |||| || || | Sbjct 11987 GAGGGTGAGCGAGCACGCACAAGGGACAACAACTTGCTTGGAAAATTCGAACTTTCTGGA 12046 Query 350576 ATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAAT 350635 || || || ||| | || |||||||||||||| ||| | || || |||||| | || Sbjct 12047 ATCCCCCCTGCACCTCGTGGCGTTCCTCAGATTGAGGTCACCTTTGACATTGATGCCAAC 12106 Query 350636 GGTATTTTAAATGT 350649 ||||| |||||||| Sbjct 12107 GGTATCTTAAATGT 12120 Score = 89.7 bits (98), Expect = 2e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 ||||||| || ||||| || || || ||||| ||||||||||| || ||||| ||||| | Sbjct 11256 TATCAAAGTCCTCACCGCCCAAGTGAGTATCACCAGCAGTAGCCTTGACTTCGAATATAC 11197 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | |||||||| | | | || |||||||| ||||| || || | |||||| Sbjct 11196 CCTCTTCAATCGTCAGGAGGGAAACATCAAAAGTACCTCCTCCAAGATCAAA 11145 >seq14965 Length=33111 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || || |||||||| || || || || || || ||||| || || Sbjct 8047 CATACCACCACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTC 8106 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || ||||| || || | ||| || || |||||||| | ||| |||||||| || Sbjct 8107 TGAAAGGGTGCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGG 8166 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || ||||| |||||||| || || ||||| || || || || | || |||| ||| Sbjct 8167 AGGGATACCTTCCTTATCCTGGATCTTCGCTTTAACGTTGTCGATGGTGTCTGATGATTC 8226 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || | ||||| || || | ||| || || || |||||||| Sbjct 8227 CACTTCGAGGGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 Score = 120 bits (132), Expect = 9e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606 || || || || ||||||||||| | || ||||| ||||| | ||| || ||||| || Sbjct 7859 TCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCAGCGAAA 7918 Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666 || ||||||||||| || || ||||| || || || || ||||| || || || ||||| Sbjct 7919 ATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATCTTCGCCTTGACATTG 7978 Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726 ||||||| || || | || || || | || | ||||| || || | || || ||| Sbjct 7979 TCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTCACA 8038 Query 140727 AAAATCTGCAT 140737 ||||||||||| Sbjct 8039 AAAATCTGCAT 8049 Score = 111 bits (122), Expect = 5e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| |||||||| || ||||| || ||||||||||| || Sbjct 8275 CATACCACCACGCAGACGGAGAACCAGATGAAGGGTCGACTCCTTCTGAATATTATAGTC 8334 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || ||||| || ||||| |||||||||||||| || || || Sbjct 8335 GGACAGCGTACGACCATCCTCTAGTTGCTTGCCAGCGAAGATTAGACGTTGTTGGTCGGG 8394 Query 140627 AGGAAT 140632 ||| || Sbjct 8395 AGGGAT 8400 >seq9834 Length=29888 Score = 150 bits (166), Expect = 5e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| || ||||| | | | ||| |||||||| |||||||| || || || || ||||| Sbjct 139 CATGCCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATC 198 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||||||||| || || ||||| || || | ||||||||||| || Sbjct 199 AGAGAGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGG 258 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||||||| || ||||| || || || || || || ||||| | || || | || Sbjct 259 AGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTC 318 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | |||||||| || || || || || || || ||||| Sbjct 319 GACCTCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 109 bits (120), Expect = 2e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| | || ||||| ||||| || || || || || |||||||| || || Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || || |||||||| | ||||||| || || || || || | ||||||||| || || Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || |||||||||||||| Sbjct 122 GTCTTGACAAAAATCTGCAT 141 Score = 104 bits (114), Expect = 7e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | | |||||||| || || |||||||| || || || | Sbjct 363 TTTGCATACCACCACGGAGGCGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGT 422 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| | || |||||||| || || || |||||||| ||||| ||||| ||||| | Sbjct 423 AATCAGAGAGAGTACGCCCATCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGT 482 Query 140623 CAGGAGGAAT 140632 |||| || || Sbjct 483 CAGGGGGGAT 492 >seq19664 Length=17166 Score = 100 bits (110), Expect = 9e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 |||||||| ||||| || || || || |||||||||||||| ||||| || |||||| Sbjct 6642 GCTGTTATCACTGTTCCTGCTTACTTCAATGATGCCCAGCGCCAAGCAACTAAGGATGCT 6583 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || ||||| || || ||||||| | |||||||||||||||| || || || | Sbjct 6582 GGTCAAATTGCTGGACTAGATGTTCTCCGGGTGATTAATGAACCCACGGCAGCGGCCCTG 6523 Query 349730 GCATATGGGCTTGAT 349744 || ||||| |||||| Sbjct 6522 GCTTATGGTCTTGAT 6508 >seq68235 Length=344 Score = 98.7 bits (108), Expect = 3e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 ||||||||||||| ||||| || ||||| ||||| || || | || || || || || | Sbjct 125 CAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGA 66 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 |||| || ||||||||||| | || ||||| ||||| || || || || || ||||||| Sbjct 65 GTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 6 Query 140650 TTTT 140653 | || Sbjct 5 TCTT 2 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 ||||||||||| | || ||||| ||||| || || || || || |||||||| || || Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717 || ||||| ||||| | ||| || | || || || || || | |||||||| || || Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 140718 GTTTTTACAAAAATCTGCAT 140737 || || ||||| |||||||| Sbjct 223 GTCTTGACAAAGATCTGCAT 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1513528788513852