Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5859 105 7e-18 >seq5859 Length=97331 Score = 105 bits (116), Expect = 7e-18 Identities = 333/509 (65%), Gaps = 18/509 (4%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 || ||||| | || || | || || ||||| | | ||||||||| || ||||||||| Sbjct 76179 CCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTC 76120 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||||||| ||||||| ||| || ||| ||| ||||||||||||||| || ||| Sbjct 76119 TTCAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAG 76060 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTC 74944 || || | |||| |||| | | || | ||| ||||| | | ||||| || Sbjct 76059 GCCACCAACCGTTCACCGAATGTCGAAT-GTTTGTCGGATATCCACCGCAGGGCCCAGTC 76001 Query 74945 AGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC-T 75002 ||| ||||| || | ||||| | || ||||| || | ||| || ||||| | Sbjct 76000 AGCCTTTCGCTTTA-TACAGGGAATGGTCTCGATGGCGTCGAAAAG----ATATTCTCGT 75946 Query 75003 TC---GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGAC 75059 || || ||| |||| | |||| || | || ||||| ||||| || ||||| Sbjct 75945 TCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTT 75886 Query 75060 TCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAA 75119 || | | ||| | |||||||| | ||||| || |||| || || || |||||| Sbjct 75885 TCCATCATAATTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAA 75826 Query 75120 AAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACC 75179 || || || ||||| | || || || || || || ||||| || || || || Sbjct 75825 AACCTCTCAAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACA 75766 Query 75180 ATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCC 75236 ||| || || || || | ||| ||| | |||| ||| || | || ||| Sbjct 75765 TGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTG 75706 Query 75237 GCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | | ||| ||||| ||| | ||||| || Sbjct 75705 GAAAGATCCATCTCTTCGGCGGTCCAAAA 75677 Score = 93.3 bits (102), Expect = 5e-14 Identities = 275/418 (66%), Gaps = 17/418 (4%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| ||||| | || || | ||||| || || | | ||||||||| ||||| || || Sbjct 74134 GCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTT 74193 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 |||||||||||| || || ||| || || ||| || |||||||| || ||||| Sbjct 74194 CTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAA 74253 Query 74888 GGCGACAAGGCGTTGCGCGA------ACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCA 74941 || | ||||| | ||| | || || | |||| | ||||| | ||||||| Sbjct 74254 TGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCA---ATCCATTTAAGAGCCCA 74310 Query 74942 TTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 || ||||| | ||||| ||||| || || || || | ||| ||| | | | Sbjct 74311 GTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTG 74370 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | ||||| |||||| | ||||| | | || || || |||||||| || || Sbjct 74371 ATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAGTTTCCGAATGTATGTTTTC 74430 Query 75062 GTTGAACGAC-TGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAA 75120 | | | ||| || | | ||||| | || || ||||| | || || |||| |||| Sbjct 74431 GAT-CATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAA 74489 Query 75121 AATTCATGTCGATA---TTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAG 75175 | || | || ||| || || |||| ||||| || || || ||||||||||| || Sbjct 74490 A--TC-TTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAG 74544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546608015663200