Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq9834 170 2e-37 seq68235 132 5e-26 seq14965 131 2e-25 seq3995 113 5e-20 >seq9834 Length=29888 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||||||||| || || ||||| || || |||||||| ||||| Sbjct 369 ATGCAAATCTTCGTCAAGACGCTGACAGGAAAGACCATCACCCTTGAGGTCGAGTCTTCG 310 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || || ||||||||||| ||||||||||| || ||| Sbjct 309 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCCGATCAG 250 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || | ||||| ||||| ||||| || || |||| ||| || || | || || || Sbjct 249 CAACGCTTGATTTTCGCTGGCAAGCAGCTTGAAGATGGTCGCACTCTCTCTGATTACAAC 190 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || |||||||| || || || Sbjct 189 ATCCAGAAGGAGTCTACCCTTCATCTCGTTTTGCGTCTGCGTGGCGG 143 Score = 123 bits (136), Expect = 3e-23 Identities = 112/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| || ||||| || || || ||||| |||||| | Sbjct 141 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACAATCACGCTGGAGGTCGAGTCATCT 82 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||||| || ||||||||||||||||| || || || |||||| Sbjct 81 GACACCATTGATAACGTTAAGGCAAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 22 Query 27526 CAGCGTCTAATTTTTGCTGGT 27546 ||||| | || ||||||||| Sbjct 21 CAGCGCTTGATCTTTGCTGGT 1 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || || ||||| ||||| || ||||||| ||||| Sbjct 492 ATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGTACT 433 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | || || || |||| || || || || || ||||| |||||||| || || ||| Sbjct 432 CTCTCTGATTACAACATCCAGAAAGAGTCAACCCTCCATCTTGTCTTGCGCCTCCGTGGT 373 Query 27631 GG 27632 || Sbjct 372 GG 371 >seq68235 Length=344 Score = 132 bits (146), Expect = 5e-26 Identities = 114/141 (81%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| ||||| || ||||| || || || ||||| ||||| Sbjct 204 ATGCAGATCTTTGTCAAGACTCTTACTGGAAAGACGATCACGCTGGAGGTGGAGTCGTCG 263 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| ||||||| || ||||||||||||||||| || || || |||||| Sbjct 264 GATACCATTGACAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 323 Query 27526 CAGCGTCTAATTTTTGCTGGT 27546 ||||| | || ||||||||| Sbjct 324 CAGCGCTTGATCTTTGCTGGT 344 Score = 125 bits (138), Expect = 8e-24 Identities = 101/122 (83%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| || || || ||||||||||| | || |||||||||||| Sbjct 2 AAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAAG 61 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||| | ||| || || | |||||||| | || ||||| |||||||||||| Sbjct 62 CAACTCGAGGACGGTCGCACTCTTTCCGACTATAACATTCAGAAGGAGTCCACTCTTCAT 121 Query 27610 CT 27611 || Sbjct 122 CT 123 >seq14965 Length=33111 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | || || |||||||| || | ||||| ||||| Sbjct 8049 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCG 7990 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||||| || ||||| ||||||||||| ||||| || |||||| Sbjct 7989 GACACGATTGACAATGTCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACCAG 7930 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| ||||| ||||| |||||| | || || | || ||||| | || ||||| Sbjct 7929 CAACGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATAAC 7870 Query 27586 GTCCAAAAGGAA 27597 |||| |||||| Sbjct 7869 ATCCAGAAGGAA 7858 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| |||||||| || || || || |||||||| || ||||||||||| ||||| Sbjct 8833 AATGCAGATCTTTGTTAAAACACTCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTC 8774 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| || | || ||||||| |||||||||||||||||||| Sbjct 8773 AGATACTATCGATAACGTGAAGGCCAAAATTCAGGACAAGGAGGG 8729 >seq3995 Length=12643 Score = 113 bits (124), Expect = 5e-20 Identities = 100/125 (80%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||||| || ||||||||||||||||| || || || ||||||||||| | || |||||| Sbjct 1 AAGGCAAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTTGCT 60 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 |||||||| |||||||| | ||| || || | || ||||| |||| ||||| |||| Sbjct 61 GGTAAGCAGCTCGAGGACGGTCGGACTCTTTCGGATTATAACATCCAGAAGGAGAGCACT 120 Query 27604 CTTCA 27608 ||||| Sbjct 121 CTTCA 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569676756630080