Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3995 109 3e-19 seq68235 104 1e-17 seq14965 102 5e-17 >seq3995 Length=12643 Score = 109 bits (120), Expect = 3e-19 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 |||| || |||||||||||||| || ||||||||||| ||||| || || |||| || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 | || ||||| ||||| || || ||||| ||||| ||||| | ||||||||||| Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 16 >seq68235 Length=344 Score = 104 bits (114), Expect = 1e-17 Identities = 94/117 (80%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 34498 ACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| |||||| |||||| ||||||||||| || ||||| || || |||| || Sbjct 127 ACCAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTC 68 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 ||||| ||||| ||||| || || ||||| ||||| ||||| | ||||||||||| Sbjct 67 GAGTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 11 >seq14965 Length=33111 Score = 102 bits (112), Expect = 5e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 34510 GTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCG 34569 ||||| ||||| || ||||||||||| ||||| || ||| ||||||| | ||| || || Sbjct 7853 GTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAATTGCTTCCCA 7912 Query 34570 GCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTT 34629 || || || | ||| || ||||| || || | |||||||||||| ||| || | || Sbjct 7913 GCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCT-TGAATCTTCGCCTT 7971 Query 34630 AACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGT 34688 || | ||| ||||| ||| || |||| || || || || || || || || Sbjct 7972 GACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCCGTCAAGGT 8031 Query 34689 TTTCACAAAAATCTGCAT 34706 ||||||||||||||||| Sbjct 8032 CTTCACAAAAATCTGCAT 8049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314388661685972