Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq14965 82.4 5e-11 >seq14965 Length=33111 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/213 (69%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||||||||| || | || ||||| ||| || | || || || | Sbjct 8049 ATGCAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCG 7990 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | ||||| ||||| ||||| || || ||||| || ||| |||| || | Sbjct 7989 GACACGATTGACAAT--GTCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACC 7932 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 ||||||| | ||||| || || || |||||||| |||| |||| | | || ||||| | Sbjct 7931 AGCAACGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATA 7872 Query 27968 ACATCCAAAAAGAGAGCACTTTGCA-TTTGGTT 27999 ||||||| || || ||||| ||||| |||||| Sbjct 7871 ACATCCAGAAGGAAAGCACCTTGCACCTTGGTT 7839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355476903603468