Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq9834 165 2e-35 seq14965 140 8e-28 seq71442 111 4e-19 seq3995 111 4e-19 seq68235 109 1e-18 seq21031 109 1e-18 seq14872 95.1 3e-14 >seq9834 Length=29888 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || || ||||| || ||||| || |||||||| ||||| | || || | |||||||| Sbjct 161 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCTTCA 220 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 ||||||||||| ||||| || | |||||| || || ||||||| |||||||||||||||| Sbjct 221 AGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCCTTCCTTGTCCTGG 280 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| || |||||||| || || ||||| || ||||| |||||| Sbjct 281 ATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTT 340 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || | ||||| Sbjct 341 CCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 113 bits (124), Expect = 1e-19 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || || ||||| | ||| || |||||||| || | || ||||||||||| |||||| Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || ||||| || ||||||||||| || ||||| || ||||| |||||||| || ||| Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121 Query 211095 GTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| Sbjct 122 GTCTTGACAAAAATCTGCAT 141 >seq14965 Length=33111 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| |||||||| || || || || || || ||||| || || || | |||||| Sbjct 8056 ACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAAAGGGT 8115 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || |||| ||||| || || ||||| | || || || || ||||| | || Sbjct 8116 GCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGGATACC 8175 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||| ||||||||||| ||| ||||| ||||||||||| || ||| || ||||| Sbjct 8176 TTCCTTATCCTGGATCTTCGCTTTAACGTTGTCGATGGTGTCTGATGATTCCACTTCGAG 8235 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| || || | |||||| Sbjct 8236 GGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 Score = 127 bits (140), Expect = 5e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| | ||| || || |||||||||||||| | |||||| | || ||||||| Sbjct 7842 CAAGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCA 7901 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||| || ||||| || || ||||| ||||| || |||| || |||||||| || | Sbjct 7902 ATTGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAA 7961 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || || || ||||| || || ||||| | ||||| ||||| | Sbjct 7962 TCTTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCC 8021 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| | ||||| ||||| | |||||| Sbjct 8022 CCGTCAAGGTCTTCACAAAAATCTGCAT 8049 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||||||||| || || || |||||||| || ||| ||| ||||| Sbjct 8451 CCTTCCTTATCCTGGATCTTCGCCTTTACATTGTCGATGGTATCCGAGGATTCCACCTCC 8510 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| |||||||| ||||| || || | ||||| Sbjct 8511 AGTGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 8554 >seq71442 Length=423 Score = 111 bits (122), Expect = 4e-19 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || ||||||||||| |||||||| ||||| | ||| || | ||||| Sbjct 273 AGGACTAGATGGAGCGTGGACTCTTTCTGGATGTTGTAATCAGAAAGTGTGCAACCATCC 332 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||| |||| ||||||||| | || | ||||| | | ||| ||| ||| Sbjct 333 TCAAGCTGCTTGCTAGCGAGGATAAGGCGCCGCTGATTGGGAGGTATTTCTTTCTTATCC 392 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGT 211053 |||||||| || |||| | |||||||| Sbjct 393 TGGATCTTGGCCTTGTCGTTGTTGATGGTGT 423 >seq3995 Length=12643 Score = 111 bits (122), Expect = 4e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||||||| ||| || |||||||||||||||| ||| |||| || || || ||||| Sbjct 126 GTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGAGCTG 67 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| | ||| || |||||||| || | || ||||||||||| ||||| Sbjct 66 CTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT 7 Query 211031 T 211031 | Sbjct 6 T 6 >seq68235 Length=344 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGT 211034 || || ||||| | ||| || |||||||| || | || ||||||||||| |||||| Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 211035 TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 ||||| || || ||||| || || || ||||| || |||||||||||||| || ||| Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 211095 GTCTTTACAAACACCTGCAT 211114 ||||| ||||| | |||||| Sbjct 223 GTCTTGACAAAGATCTGCAT 204 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| |||||||||||||| || || |||||||| || | ||| || | || || || | Sbjct 125 CAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCTCGA 66 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 | ||||| || || ||||| | ||| || |||||||| || | || ||||||||||| | Sbjct 65 GTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 6 Query 211027 TCTTT 211031 ||||| Sbjct 5 TCTTT 1 >seq21031 Length=4691 Score = 109 bits (120), Expect = 1e-18 Identities = 150/209 (72%), Gaps = 7/209 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||||| |||||||| ||||| | ||| || | ||||| Sbjct 4532 AGGACTAGATGGAGCATGGACTCTTTCTGGATGTTGTAATCAGAAAGTGTGCAACCATCC 4473 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||| | || ||||||| | | || | ||||| | | ||| ||| ||| Sbjct 4472 TCAAGCTGCTTGCTAGTGAGGATAAGGTGCCGCTGATTGGGAGGTATTTCTTTCTTATCC 4413 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || |||| | ||||||||| || || ||| || ||||||||| Sbjct 4412 TGGATCTTGGCCTTGTCGTTGTTGATGGTGTCCGATGAGTCGACC---AGCGTGATCGTC 4356 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTG 211111 || || || ||||| || || | ||| Sbjct 4355 TTGCC----AGGGTCTTGACGAAGATCTG 4331 >seq14872 Length=27679 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||||||||| || ||| ||||| || |||||||| || ||| ||||| Sbjct 25238 CCTTCCTTGTCCTGGATTTTGGCTTTGACGTTGTCAATGGTGTCCGACGATTCCACCTCA 25297 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| |||||||| ||||| || || | ||||| || Sbjct 25298 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 25344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157831927274660