Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq14965 132 1e-25 seq9834 125 2e-23 seq277 107 5e-18 seq68235 86.0 1e-11 >seq14965 Length=33111 Score = 132 bits (146), Expect = 1e-25 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| | ||| ||| || |||| || ||||| | | || | ||| ||||| | Sbjct 7842 CAAGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCA 7901 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 |||||||||||||| || || ||||| |||||||| |||||||| ||||||||||| | Sbjct 7902 ATTGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAA 7961 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| || || ||||| || | || || || |||||||| ||||| | Sbjct 7962 TCTTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCC 8021 Query 225686 CCGTCAAAGTTTT 225698 ||||||| || || Sbjct 8022 CCGTCAAGGTCTT 8034 Score = 129 bits (142), Expect = 1e-24 Identities = 164/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| |||||||| || || || ||||| || |||| |||||| || | | || Sbjct 8056 ACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGAAAGGGT 8115 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || | |||||||| || ||||| | || || || || || || ||||| Sbjct 8116 GCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGGGATACC 8175 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||| || |||||| || |||| | | | |||||||||||||| | |||||| || | Sbjct 8176 TTCCTTATCCTGGATC-TTCGCTTTAACGTTGTCGATGGTGTCTGATGATTCCACTTCGA 8234 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || ||||| || || | ||| | ||||| Sbjct 8235 GGGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || || || || |||| ||||| || | |||||| |||||||| Sbjct 8571 AGAACTAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAAAGTCCTCCCATCC 8630 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || ||||| ||||||||||| || || ||||| || ||||| || || Sbjct 8631 TCGAGCTGTTTCCCAGCGAAAATGAGGCGTTGCTGATCGGGAGGGAT 8677 >seq9834 Length=29888 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || || || || || || || || |||| |||||||| | | ||| Sbjct 148 ACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAGAGAGT 207 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| |||||||| || | ||||| || ||||| ||||| || Sbjct 208 GCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGAATTCC 267 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| |||||||| ||| || || |||||||| || | || || || | Sbjct 268 TTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCAAG 327 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||| || || | ||| | |||||| Sbjct 328 GGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||| ||||| || || ||||| |||| |||||||| | | ||| Sbjct 376 ACGGAGGCGCAAGACAAGATGGAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGAGT 435 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | |||||| ||||||||||| ||||||||||| || || || ||||| || || |||| Sbjct 436 ACGCCCATCCTCTAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATAC 494 >seq277 Length=17503 Score = 107 bits (118), Expect = 5e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 |||||||||||||| | || | |||| | ||||||||||| | | ||| |||| || Sbjct 5540 AATGGTAATTTATGTAGTGACATACCATTTGTTCTCATATTAAGTGTTGTACTAATGAAA 5599 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 |||||||| |||| | |||||| | || ||||| |||||||| || || |||||||| Sbjct 5600 TTTATAGCACCTAATAAAGAAGAAACCCCAGCAAGGTGTAAACTGAAGATAGCTAAATCA 5659 Query 371485 ACGGAACCGCCGGAGTGAG 371503 || || || || ||||||| Sbjct 5660 ACAGATCCCCCTGAGTGAG 5678 >seq68235 Length=344 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| | || || ||||| ||||| || || |||||||| || |||||| | Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| || ||||| || || | ||||| || | |||||||||||| || || | | Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 225694 GTTTT 225698 || || Sbjct 223 GTCTT 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191173114165496