Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq5859 188 6e-43 >seq5859 Length=97331 Score = 188 bits (208), Expect = 6e-43 Identities = 376/551 (68%), Gaps = 11/551 (2%) Strand=Plus/Plus Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607 |||||||||| |||| || || || | ||||| || || ||||| || || || Sbjct 74114 CACGCAAAATTTGTGTGCATGCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAG 74173 Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667 || ||||| | |||| || || | |||||||||||| || ||||| || || || ||| Sbjct 74174 CCAGGCATGAGTCCTCGTTTCTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAAT 74233 Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAG--CTGGCTTTGTCTT 4725 |||||||| || || ||||| |||| | || | | || || ||| || ||| Sbjct 74234 ATGCCTTCAACTGCAGCAAATGCTATGAGGCGCTCCGCAAAAGATGACTG--TTCGTCGG 74291 Query 4726 TAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGT 4785 ||||||||| | ||||||| ||||| | ||| || || || || || | || || | Sbjct 74292 CAATCCATTTAAGAGCCCAGTCGGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCT 74351 Query 4786 TAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACA 4845 || | | | | || | || |||| | || || || || || | ||| Sbjct 74352 CGAAAAGGTGAGTCCGTTGATGAGGATCTTTGACGTATGTATCAATAAGCAAAGAATAAG 74411 Query 4846 TTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA 4905 |||| |||||||| ||||| || | |||||||| || ||||| | ||||||| | Sbjct 74412 TTTCCGAATGTATGTTTTCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGA 74471 Query 4906 CTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTG 4965 |||||||||| | |||||||||| | | |||||| || || || || || || | Sbjct 74472 CTTGAACTTCCTGCGAAAATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCG 74531 Query 4966 CAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAG-GCTTA--AGTTTTTTCC 5022 | ||||| || | || |||||| ||||| || ||||||||| | ||| | ||||||| Sbjct 74532 CGAAAAAAGCAAGAATATGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCC 74591 Query 5023 AGTGGGGCAAATCTTTAGTTAAA--TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| | ||| | || ||| || | |||||| | |||||||| || || || || Sbjct 74592 AGTCCATGAGATCAT--GTGAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGC 74649 Query 5081 TTTTTTGTACA 5091 ||| ||||||| Sbjct 74650 TTTCTTGTACA 74660 Score = 165 bits (182), Expect = 7e-36 Identities = 378/562 (67%), Gaps = 13/562 (2%) Strand=Plus/Minus Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598 |||| || ||||| ||||| |||| ||| || || | || || || ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658 || || || || ||||| | ||| | ||| || | ||| || || | || ||||| ||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAA---CGAGCTG 4715 || || || |||||||| || ||||| || || || || || ||||| ||| || Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAA-TG 76031 Query 4716 GCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTG 4775 |||||| ||||| | ||||||| ||| ||| ||| | || ||||| || Sbjct 76030 --TTTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTC 75973 Query 4776 TATATAGCGTTAAATA-ATTTACTTTTTTCAAATGGG-TCTTGAATATAAGTGTCTATTA 4833 | || |||| || | || | || || | ||| |||| || |||||||| || | Sbjct 75972 TCGATGGCGTCGAAAAGATATTCTCGTTCCG--TGGCATCTTTGATGTAAGTGTCGATGA 75915 Query 4834 GTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATC 4893 ||||| || | || || || || ||||| || ||| || || ||||| || || | Sbjct 75914 GTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAAC 75855 Query 4894 TAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATAC 4953 ||||| | ||||| |||||||| |||| || || | | ||| || || ||||| | Sbjct 75854 GCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCC 75795 Query 4954 CGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA 5013 | ||| ||||| || ||||| | ||||||||| || || | |||||| || | Sbjct 75794 CATCAGACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGA 75735 Query 5014 GT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACG 5070 | || | ||||| | | ||| || | | ||| | ||||| | |||||||||| Sbjct 75734 GACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACG 75675 Query 5071 ACGCTTCCGCTTTTTTGTACAT 5092 | || || || ||||| ||||| Sbjct 75674 AAGCCTCTGCCTTTTTATACAT 75653 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 4262 GTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCAT 4321 |||||||||||| | ||| ||||||||||| || || |||| | || || | ||||| Sbjct 73777 GTATTCGGATACCCTCTTCTCGAAGAAATTGGTCTTCCCTTGAAGTGAGATCATATCCAT 73836 Query 4322 AAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTT---AGAGCTACAAGCAA 4378 |||||| || ||||| ||||| || || | |||||| ||| || | |||||| | Sbjct 73837 AAAATCGAATGGATTTGTTGCATTATAGTACTTTTCA---TTTCCAAGGGATACAAGTAG 73893 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTTAATTCCAATTAATC 4437 || || || ||||| || ||||| || | ||| | | | ||| || || || || | | Sbjct 73894 GCGATCGGCCACAAACTCAATATATTGACACATCAATACTGCA-TTCATGCCGATGAGTG 73952 Query 4438 TCACAGGTAGCGCGTATGTCA 4458 |||||| || | || || || Sbjct 73953 CCACAGGAAGAGAGTCTGACA 73973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426586988378372