Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5859 192 8e-44 seq4769 87.8 2e-12 >seq5859 Length=97331 Score = 192 bits (212), Expect = 8e-44 Identities = 365/532 (69%), Gaps = 18/532 (3%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || ||||| | |||||| | || ||||| ||||| | || ||||| ||||| ||||| Sbjct 74135 CCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTTC 74194 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 || | ||||||||| || ||||| ||||| || || ||||||||||| || || |||||| Sbjct 74195 TTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAAT 74254 Query 48282 GCGGTAAGTCTCTCTCCGTAA-CTGGC--TTCGTTGTGTATCCACCGTTGTGCCCAATCA 48338 || | || | ||| | || || | ||||| | ||||| | ||||| || Sbjct 74255 GCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTCG 74314 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 || || | ||| |||||||| || ||||| || || | | |||| | | | ||| Sbjct 74315 GCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGA----AAAGGTGAGTCCGTTG 74370 Query 48399 CT----ATCTTTAACGTAAGTATCTATTA--AAAGACTATACATTTCGGAGTGAATATTT 48452 | |||||| ||||| ||||| || | ||||| ||| |||| || || || ||| Sbjct 74371 ATGAGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATGTTT 74428 Query 48453 TCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAA 48512 || || | |||||||| || || || | ||||||| || || || ||| || Sbjct 74429 TCGATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAA 74488 Query 48513 AATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACA 48572 |||| |||| | || ||||| || || ||||| || || ||||| || | | | Sbjct 74489 AATCTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATA 74548 Query 48573 TGTTTAATAAAATATTTTTCGTTGGAAGT---CAGTTTATTCCAGTCATTGATATCTTTT 48629 || |||||||| ||||| | | | | || |||||||| ||| ||| | | Sbjct 74549 TGAGAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGT 74608 Query 48630 GATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 || | || | |||||| || ||||||||||||||||||||||| || |||| Sbjct 74609 GAAAGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 183 bits (202), Expect = 4e-41 Identities = 381/566 (67%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| || || || ||||| || | ||| ||||| | ||| || | ||||| ||| Sbjct 76209 AACAGCAAGCACGCGAAATCTGTGTGCATACCCTCATCGCGACTGATAAGCTCGTTTGAA 76150 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || | || ||||| || ||||| || || | ||| || || | |||||| |||||| Sbjct 76149 AAGGTCAAGCCAGGCATGAGACCACGCTTCTTCAACCAGAAGATGGACGCGAATGATCCA 76090 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311 || || || |||||||| || || || || || | | || ||| | | | | Sbjct 76089 GAGAAAAAGATGCCTTCGACAGCGGCGAAGGCCACCAACCGTTCACCGAATGTCGAATGT 76030 Query 48312 TTGTG---TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 |||| ||||||||| | ||||| |||||||| ||||| ||| || || || || Sbjct 76029 TTGTCGGATATCCACCGCAGGGCCCAGTCAGCCTTTCGCTTTATACAGGGAATGGTCTCG 75970 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 || || | || ||| | | | ||| || |||||| | |||||| || || | || Sbjct 75969 ATGGCGTCGAAAAGATATTCTCGTTCCGTGGCATCTTTGATGTAAGTGTCGATGAGTAGG 75910 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 || | ||||||||||| ||||| || || || || ||||| ||||| | |||| Sbjct 75909 GAGTAGGTCTCGGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACAACGCGCT 75850 Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548 || | | || || || | |||| | ||| | |||||||| ||||| |||||| Sbjct 75849 TCCGCAACTTGGACTTCGTTTGAAAACCTCTCAAGGAGGTTCTCATTAACTATCCCATCA 75790 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GT 48605 || || || || || | ||||| || |||| ||||||| | | | Sbjct 75789 GACGCTGCGAAGAACGCGAGAACATGAGAGATGAAATGACGTTCGTTGTCGTTGAGACGG 75730 Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 || | |||||||| | ||| || || | ||| | ||||| || |||||||| || ||| Sbjct 75729 TTGTGCCAGTCATGTAGATCCTTGGAAAGATCCATCTCTTCGGCGGTCCAAAACGAAGCC 75670 Query 48666 TCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||||||||| | |||||| Sbjct 75669 TCTGCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/238 (68%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 78011 CATA-AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCAT 78069 |||| || || || |||||||| || ||| ||| ||||||| | | | ||| || | Sbjct 7026 CATACAAAAGGTCCGGTATCCAGAGTGCATAAAACAGATCTCTTGCGCGAGCTTCCTCTT 6967 Query 78070 TTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGAT 78129 |||| ||||| | || || | || || | ||||| | ||||||||||| | || Sbjct 6966 TTCCGTGGTTCTTCCTCAGGTCAATGAAATCGAAGATATCCGCGTGCCATGGTTCGATAT 6907 Query 78130 ATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 | || | | | | ||||||||||| ||||| || ||||| | ||| | || ||| || Sbjct 6906 AAATCGTGAAAGCACCAGGTCGTTTGTTACCCCCTTGATCGACATACCGAGCAGTGGCAT 6847 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 |||| | | | ||| || | ||| || || || |||||| || |||| ||| || Sbjct 6846 CATAAGCACGAAGCATGGGCACAATGCCATTCGAGTATCCATTGGTGCCAGCAATGTA 6789 Score = 84.2 bits (92), Expect = 3e-11 Identities = 168/249 (67%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 78281 CCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACC 78340 ||| ||||||||||| | ||| || | ||||||| ||||| |||||||| || || Sbjct 6700 CCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATTCC 6641 Query 78341 CTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGT 78400 || || || ||| ||||| | || || ||| | | |||| ||| | || Sbjct 6640 ATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAGGAACTGAGTTGAGGATTAGGGGT 6581 Query 78401 TCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTA 78460 || ||||| || | || || || ||||| || || || |||||| | || ||||| Sbjct 6580 ACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGGTTGTA 6521 Query 78461 TGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACAT 78520 || ||||| | || | ||||| ||| |||||||| || |||||||| | ||| Sbjct 6520 AGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATAATCAT 6461 Query 78521 ATGCTGAGG 78529 ||||| || Sbjct 6460 GTGCTGTGG 6452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693896988229760