Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5859 188 1e-42 seq4769 105 1e-17 >seq5859 Length=97331 Score = 188 bits (208), Expect = 1e-42 Identities = 362/529 (68%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 ||| ||||| | |||||| | || ||||| ||||| | |||||||| ||||| || || Sbjct 74134 GCCCTCATCACGACTAATAAGCTCATTAGAGAATGTCAAGCCAGGCATGAGTCCTCGTTT 74193 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 || | |||||||||||| ||||| ||||| || || ||||||||||| || || || || Sbjct 74194 CTTCAACCAAAATATAGCTGCGAATGATCCGGAGAAAAATATGCCTTCAACTGCAGCAAA 74253 Query 46770 TGCGACAAGTCTCTCTCCGTAAC-TGGCA--TCATTATGAATCCACCTTTGAGCCCAATC 46826 ||| | || | ||| | || || | || | |||||| | ||||||| || Sbjct 74254 TGCTATGAGGCGCTCCGCAAAAGATGACTGTTCGTCGGCAATCCATTTAAGAGCCCAGTC 74313 Query 46827 AGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATC 46886 || || | ||| |||||||| || ||||| || || | || || | || || Sbjct 74314 GGCTTTGTGCTTGACACAAGGGATGGTTTCAATTGCCTCGAAAAGGTGAGTCCGTTGATG 74373 Query 46887 ACTATCTTTAACATATGTATCTATTA--AAAGACTATACATTTCTGAATGAATGTTTTCA 46944 | |||||| || |||||||| || | ||||| ||| |||| ||||| |||||||| Sbjct 74374 AGGATCTTTGACGTATGTATCAATAAGCAAAGA--ATAAGTTTCCGAATGTATGTTTTCG 74431 Query 46945 ATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAAT 47004 || | |||||||| || || || | ||||| | | || || || ||||| Sbjct 74432 ATCATGACTTGAAATCCATAGAAGCAACGGGCTTCTGCGACTTGAACTTCCTGCGAAAAT 74491 Query 47005 CGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGT 47064 | |||| | || ||||| || || ||||| || || ||||| || | | ||| Sbjct 74492 CTTTCAATAAGGTTTTCATTGACAATGCCATCGGACGCCGCGAAAAAAGCAAGAATATGA 74551 Query 47065 TTAATAAAATA---TTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGAT 47121 |||||||| || ||| || | | | || |||||||| ||| ||| | ||| Sbjct 74552 GAGATAAAATAACGTTCGTCAGCGTTTAGCTGATTTTTCCAGTCCATGAGATCATGTGAA 74611 Query 47122 ATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACA 47170 | || | |||||| || ||||| ||||| ||||||||||| || |||| Sbjct 74612 AGGTCCAATTCTTCTGCGGTCCAAAATGATGCCTCTGCTTTCTTGTACA 74660 Score = 174 bits (192), Expect = 2e-38 Identities = 363/536 (68%), Gaps = 6/536 (1%) Strand=Plus/Minus Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || ||||| | ||| || | ||||| ||||| || | |||||||| || |||||||| Sbjct 76179 CCCTCATCGCGACTGATAAGCTCGTTTGAAAAGGTCAAGCCAGGCATGAGACCACGCTTC 76120 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || | ||| || || | |||||| |||||||| || || |||||||| ||||| ||||| Sbjct 76119 TTCAACCAGAAGATGGACGCGAATGATCCAGAGAAAAAGATGCCTTCGACAGCGGCGAAG 76060 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTAT--GA-ATCCACCTTTGAGCCCAATCA 46827 || || | | || ||| | | | || || | || ||||||| | ||||| ||| Sbjct 76059 GCCACCAACCGTTCACCGAATGTCGAATGTTTGTCGGATATCCACCGCAGGGCCCAGTCA 76000 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 |||||| ||||| ||| || || || || || || | || ||| | | | ||| Sbjct 75999 GCCTTTCGCTTTATACAGGGAATGGTCTCGATGGCGTCGAAAAGATATTCTCGTTCCGTG 75940 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 |||||| | || || || || | || || | || || ||||||||||| || Sbjct 75939 GCATCTTTGATGTAAGTGTCGATGAGTAGGGAGTAGGTCTCGGAGTGAATGTTTTCCATC 75880 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 || || || ||||| ||||| | ||||| | || || || || | |||| | Sbjct 75879 ATAATTTGGAAACCGTAGAAACAACGCGCTTCCGCAACTTGGACTTCGTTTGAAAACCTC 75820 Query 47008 TCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTA 47067 ||| | |||||||| ||||| |||||| || || || || || | ||||| Sbjct 75819 TCAAGGAGGTTCTCATTAACTATCCCATCAGACGCTGCGAAGAACGCGAGAACATGAGAG 75760 Query 47068 ATAAAATATTTTTCATCG--GTAGTCA-GTTTATTCCAGTCATTGATATCTTTTGATATA 47124 || |||| ||| | | || | | | || | |||||||| | ||| || || | | Sbjct 75759 ATGAAATGACGTTCGTTGTCGTTGAGACGGTTGTGCCAGTCATGTAGATCCTTGGAAAGA 75700 Query 47125 TCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 || | ||||| || ||||| || || |||||||| ||||||||||| | |||||| Sbjct 75699 TCCATCTCTTCGGCGGTCCAAAACGAAGCCTCTGCCTTTTTATACATTTGCCATAT 75644 >seq4769 Length=19565 Score = 105 bits (116), Expect = 1e-17 Identities = 169/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 76606 CATA-AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCAT 76664 |||| || || || |||||||| || ||| ||| ||||||| | | | ||| || | Sbjct 7026 CATACAAAAGGTCCGGTATCCAGAGTGCATAAAACAGATCTCTTGCGCGAGCTTCCTCTT 6967 Query 76665 TTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGAT 76724 |||| ||||| | || || | ||| || | ||||| | ||||||||||| | || Sbjct 6966 TTCCGTGGTTCTTCCTCAGGTCAATGAAATCGAAGATATCCGCGTGCCATGGTTCGATAT 6907 Query 76725 ATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 | |||| | | |||| |||||||| ||||| || ||||| | ||| | |||||| || Sbjct 6906 AAATCGTGAAAGCACCAGGTCGTTTGTTACCCCCTTGATCGACATACCGAGCAGTGGCAT 6847 Query 76785 TATAAACTCTCAACATTGGAATAATGCCGTTAGATGTA-CCATTTGTTCCAGAAATATA 76842 |||| | | | ||| || | |||||| || || ||| ||||| || |||| ||| || Sbjct 6846 CATAAGCACGAAGCATGGGCACAATGCCATTCGA-GTATCCATTGGTGCCAGCAATGTA 6789 Score = 95.1 bits (104), Expect = 2e-14 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 || || ||||||||||| ||||| ||| | || || | ||||| || || || || Sbjct 6702 AGCCCGATTCCTCCTGCGGTTTTACTGATCATTGCGCAACTTTTCAGGGTATCGTAAATT 6643 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 76993 || || || ||| ||| ||||| | || || ||| | | |||| ||| | Sbjct 6642 CCATCGATCGAATCGTCCTTCATGCAGACGAGGAAGCAGGAACTGAGTTGAGGATTAGGG 6583 Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || || || ||||| ||||| || |||||| | || ||| Sbjct 6582 GTACCAGCATTGAAAAGAGTGGGCGAAGCATGGGTGAAGTATCGTTCAGACATAAGGTTG 6523 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || || ||||| || || | |||| ||| |||||||||||||||||||| | | Sbjct 6522 TAAGTCTCAATGACCCGGTCGACGTCCCTGCCATGTATTCCTACAGCGACACGCATAATC 6463 Query 77114 ATATGCTGAGGTCGTTC 77130 || ||||| || || || Sbjct 6462 ATGTGCTGTGGACGCTC 6446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712142294234880