Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq14965 196 1e-44 seq9834 149 1e-30 seq68235 109 1e-18 seq3995 98.7 2e-15 seq14872 91.5 3e-13 seq11775 91.5 3e-13 seq351 86.0 1e-11 >seq14965 Length=33111 Score = 196 bits (216), Expect = 1e-44 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || ||||| | || ||| || ||||| |||||||| | Sbjct 8050 ACCACCACGGAGTCGAAGGACAAGATGCAGTGTTGATTCCTTCTGGATATTGTAGTCTGA 8109 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || ||||| | ||| |||||||||||||||||||| || || || || Sbjct 8110 AAGGGTGCGCCCGTCCTCCAATTGCTTCCCGGCAAAGATCAAACGCTGCTGATCCGGAGG 8169 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||| ||||| || |||||||| ||||| ||| | ||||| ||||| || | ||| || Sbjct 8170 GATACCTTCCTTATCCTGGATCTTCGCTTTAACGTTGTCGATGGTGTCTGATGATTCCAC 8229 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 8230 TTCGAGGGTGATAGTCTTCCCTGTCAATGTCTTCACGAAGATCTGCAT 8277 Score = 159 bits (176), Expect = 7e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 282894 AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGT 282953 || || || |||||||| || |||||||| || |||| ||| ||||| || || || | | Sbjct 7844 AGGTGCAAGGTGCTTTCCTTCTGGATGTTATAATCAGAAAGGGTGCGCCCGTCTTCCAAT 7903 Query 282954 TGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATC 283013 || ||||| || || || | |||||| ||||| |||||||||||||||||||| ||| Sbjct 7904 TGCTTCCCAGCGAAAATGAGACGTTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGAATC 7963 Query 283014 TTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCC 283073 || || || || | || || |||||||||| || || || | ||||| ||||| ||| Sbjct 7964 TTCGCCTTGACATTGTCAATCGTGTCCGAAGACTCTACCTCCAACGTGATAGTCTTCCCC 8023 Query 283074 GTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || |||||||| Sbjct 8024 GTCAAGGTCTTCACAAAAATCTGCAT 8049 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||||||| | || || || || || || ||||| | Sbjct 8278 ACCACCACGCAGACGGAGAACCAGATGAAGGGTCGACTCCTTCTGAATATTATAGTCGGA 8337 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 ||||| || |||||||||||||| || || || ||||| | |||||||||||| Sbjct 8338 CAGCGTACGACCATCCTCTAGTTGCTTGCCAGCGAAGATTAGACGTTGTTGGTC 8391 Score = 86.0 bits (94), Expect = 1e-11 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| |||| || |||||||| || ||||| | ||||| || ||||| | ||| || Sbjct 8448 TACCCTTCCTTATCCTGGATCTTCGCCTTTACATTGTCGATGGTATCCGAGGATTCCACC 8507 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||||||||| | ||||| ||||| || ||||| Sbjct 8508 TCCAGTGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 8554 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| || || || || || ||| |||||||||| || || | ||||| || Sbjct 8729 CCCTCCTTGTCCTGAATTTTGGCCTTCACGTTATCGATAGTATCTGAGGACTCGACCTCA 8788 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||||||| ||||| || || | || ||||| || ||||||||| Sbjct 8789 AGAGTGATGGTCTTGCCAGTGAGTGTTTTAACAAAGATCTGCATT 8833 >seq9834 Length=29888 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| || | || ||||| | || || || ||||||||||| |||| Sbjct 143 CCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGAG 202 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| ||||| || || || || || || || ||||| ||||| || || ||| Sbjct 203 AGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGGAGGA 262 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| || || ||| | || || |||||||||| ||||| Sbjct 263 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTCGACC 322 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||| ||||| ||||| || ||||| Sbjct 323 TCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 118 bits (130), Expect = 2e-21 Identities = 110/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||||||||| || || |||||| ||| || ||||||||||| || |||||||| Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 61 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || ||| |||| || ||||| || | ||||| || || ||||| ||||| || || | | Sbjct 62 TTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAGA 121 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| || || |||||||| Sbjct 122 GTCTTGACAAAAATCTGCAT 141 >seq68235 Length=344 Score = 109 bits (120), Expect = 1e-18 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 282960 CCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT 283019 || ||||||||||| || || |||||| ||| || ||||||||||| || |||||||| Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 283020 TTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAA 283079 || || | || || || ||||| | || || || || ||||||||||| || || | | Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 283080 GTCTTAACGAATATCTGCAT 283099 ||||| || || |||||||| Sbjct 223 GTCTTGACAAAGATCTGCAT 204 Score = 96.9 bits (106), Expect = 7e-15 Identities = 99/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| |||| | ||| || || || ||||| ||||| | ||| ||||| || |||| Sbjct 128 TACCAAGATGAAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGAGTGCGACCGTCCT 69 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | ||||| || || ||||||||||| || || |||||| ||| || ||||||||||| | Sbjct 68 CGAGTTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCT 9 Query 283009 GGATCTTT 283016 | |||||| Sbjct 8 GAATCTTT 1 >seq3995 Length=12643 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| || || |||||||| || || | ||| || || || ||||| || || || || Sbjct 119 GTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGAGCTGCTTACCA 60 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021 ||||||||||| || || |||||| ||| || ||||||||||| || |||||||| || Sbjct 59 GCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCCTT 1 >seq14872 Length=27679 Score = 91.5 bits (100), Expect = 3e-13 Identities = 87/110 (79%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 282994 TACCCT-CCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||| ||||||| ||||| || ||||| ||| | || || |||||||| | ||| || Sbjct 25235 TACCCTTCCTTGTCCTGGATTTTGGCTTTGACGTTGTCAATGGTGTCCGACGATTCCACC 25294 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| ||||| | ||||| ||||| || ||||| || Sbjct 25295 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 25344 >seq11775 Length=34147 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || ||||||||||| ||||| ||||| ||| ||||||| |||||||| | ||||||||| Sbjct 24079 CCTTCCTTGTCTTGTATCTTAGCTTTGACGTTATCGATTGTGTCCGAGGACTCGACTTCG 24020 Query 283056 AGAGTGATCGTCTTACCCGT 283075 |||||||| || || ||||| Sbjct 24019 AGAGTGATAGTTTTGCCCGT 24000 >seq351 Length=6911 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 12/191 (6%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||||| ||| | || | | ||| || || || || | ||| Sbjct 5967 TCCTTCTGAATGTTGTAGTCAGAAAGGGAGCAGG--TTCTCAAGCTGCTTGCCAGTGAAG 6024 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | || ||||| || |||||||| || || ||||||||||| || | Sbjct 6025 ATGAGACACTGTTG----------ATGCCCTCCTTCTCCTGAATCTTTGCTTTGACATTG 6074 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || |||||| | ||| || || || ||||| ||||| ||| |||| ||||| || Sbjct 6075 TCAATCGTGTCCAACAATTCAACCTCAAGGGTGATGGTCTTCCCCATCAATGTCTTCACA 6134 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 6135 AAGATATGCAT 6145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045547145922136