Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq14965 150 1e-31 seq9834 132 3e-26 seq68235 91.5 1e-13 seq3995 89.7 4e-13 seq14872 86.0 5e-12 >seq14965 Length=33111 Score = 150 bits (166), Expect = 1e-31 Identities = 150/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||| ||||| || | || |||| |||| |||| ||||||||||||||| Sbjct 8087 TCCTTCTGGATATTGTAGTCTGAAAGGGTGCGCCCGTCCTCCAATTGCTTCCCGGCAAAG 8146 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||||||||||||||| | ||| | ||||||||| ||| |||||| |||| || ||| Sbjct 8147 ATCAAACGCTGCTGATCCGGAGGGATACCTTCCTTATCCTGGATCTTC-GCTTTAACGTT 8205 Query 44267 -CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | |||||||| || | || || ||||| || || | |||||||| Sbjct 8206 GTCGATGGTGTCTGATGATTCCACTTCGAGGGTGATAGTCTTCCCTGTCAATGTCTTCAC 8265 Query 44326 GAAGATTTGCAT 44337 |||||| ||||| Sbjct 8266 GAAGATCTGCAT 8277 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/106 (80%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCT 44291 |||||||| ||| |||||| ||| || ||| | ||||| || | ||||||||||| Sbjct 8451 CCTTCCTTATCCTGGATCTTCGCCTTTACATTGT--CGATGGTATCCGAGGATTCCACCT 8508 Query 44292 CCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || ||||| |||||||||||||| |||||||||||||| Sbjct 8509 CCAGTGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 8554 >seq9834 Length=29888 Score = 132 bits (146), Expect = 3e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | ||| | ||| || || ||||| || |||||| |||||||||||||| Sbjct 139 CATGCCGCCACGCAGACGCAAAACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATC 198 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || |||||||| || || || ||||| || |||||||| | Sbjct 199 AGAGAGAGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAAATCAAGCGTTGCTGATCGGG 258 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | |||||||| ||| ||||| ||| | | | |||||||| | || || Sbjct 259 AGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAAGACTC 318 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | || || |||||||| || || ||||| |||||||||||||| Sbjct 319 GACCTCAAGGGTGATGGTCTTTCCTGTCAGCGTCTTGACGAAGATTTGCAT 369 Score = 87.8 bits (96), Expect = 1e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||||||||| |||||||| || | || | || ||||| ||| ||||| ||| Sbjct 2 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTT-TGC 60 Query 44258 TTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 | || ||| | |||||||| | || || ||||||| ||| || |||||||| || || Sbjct 61 CTTAACGTTATCAATGGTGTCAGATGACTCGACCTCCAGCGTGATTGTCTTTCCAGTAAG 120 Query 44317 GGTCTTCACGAAGATTTGCATG 44338 ||||| || || || |||||| Sbjct 121 AGTCTTGACAAAAATCTGCATG 142 >seq68235 Length=344 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || ||||||||||| |||||||| || | || | || ||||| ||| ||||| | Sbjct 343 CCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATCTTTGCC 284 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| | | ||||| || | || |||||||||| ||| ||||||||||| || || Sbjct 283 TTCACATTGTCAATGGTATCCGACGACTCCACCTCCAGCGTGATCGTCTTTCCAGTAAGA 224 Query 44318 GTCTTCACGAAGATTTGCAT 44337 ||||| || ||||| ||||| Sbjct 223 GTCTTGACAAAGATCTGCAT 204 >seq3995 Length=12643 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 44130 CCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCA 44189 ||| |||||| ||||||||||| |||||||| ||||| | || || |||| || | Sbjct 130 CCAAGTGAAGAGTGCTCTCCTTCTGGATGTTATAATCCGAAAGAGTCCGACCGTCCTCGA 71 Query 44190 GCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTA 44249 ||||||| || ||||||||||| |||||||| || | || | || ||||| ||| | Sbjct 70 GCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAA 11 Query 44250 TCTT 44253 |||| Sbjct 10 TCTT 7 >seq14872 Length=27679 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/116 (78%), Gaps = 3/116 (3%) Strand=Plus/Plus Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTC 44292 |||||||| ||| || || |||| | ||| | |||||||| | ||||||||||| Sbjct 25238 CCTTCCTTGTCCTGGATTTTG-GCTTTGACGTTGTCAATGGTGTCCGACGATTCCACCTC 25296 Query 44293 CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTGAATGA 44348 | || |||||||| |||||||||||||| |||||||||||||| | ||||||| Sbjct 25297 AAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCAT-CTTTGAATGA 25351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359600431849428