Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tricholoma_20matsutake_20[genbank_20GCA_5F001652835.1_202016-05-03] 88,884 sequences; 131,718,925 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14965 159 8e-34 seq9834 98.7 2e-15 seq3995 96.9 8e-15 seq68235 95.1 3e-14 seq14872 93.3 1e-13 >seq14965 Length=33111 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | ||||| || || ||||||||||| |||||| |||||| Sbjct 8274 CAGATCTTCGTGAAGACATTGACAGGGAAGACTATCACCCTCGAAGTGGAATCATCAGAC 8215 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| ||||| ||||| || ||||| ||||||||||| ||||| Sbjct 8214 ACCATCGACAACGTTAAAGCGAAGATCCAGGATAAGGAAGGTATCCCTCCGGATCAGCAG 8155 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| ||||| || || | || || || | || ||| | || || || || Sbjct 8154 CGTTTGATCTTTGCCGGGAAGCAATTGGAGGACGGGCGCACCCTTTCAGACTACAATATC 8095 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || |||||||||||||||||||| Sbjct 8094 CAGAAGGAATCAACACTGCATCTTGT 8069 Score = 105 bits (116), Expect = 2e-17 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | || || || || ||||| | ||||| || || ||| Sbjct 8046 CAGATTTTTGTGAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTAGAGTCTTCGGAC 7987 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| |||||||| ||||| || || || || || ||||||||| Sbjct 7986 ACGATTGACAATGTCAAGGCGAAGATTCAAGACAAGGAGGGTATTCCACCCGACCAGCAA 7927 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || || | ||||| || | || ||| | ||||||||| || Sbjct 7926 CGTCTCATTTTCGCTGGGAAGCAATTGGAAGACGGGCGCACCCTTTCTGATTATAACATC 7867 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || ||| || |||| |||| || Sbjct 7866 CAGAAGGAAAGCACCTTGCACCTTGGTT 7839 >seq9834 Length=29888 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || ||||| || ||||| || ||||| || ||||| || || ||| Sbjct 138 CAGATTTTTGTCAAGACTCTTACTGGAAAGACAATCACGCTGGAGGTCGAGTCATCTGAC 79 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || ||||||||||||||| || || ||||| || |||||||| Sbjct 78 ACCATTGATAACGTTAAGGCAAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 19 Query 178044 CGACTTATCTTCGCCGG 178060 || | ||||| || || Sbjct 18 CGCTTGATCTTTGCTGG 2 >seq3995 Length=12643 Score = 96.9 bits (106), Expect = 8e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 ||||||||||||||| || || ||||| || |||||||| || | ||||| || || || Sbjct 6 AAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAA 65 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 |||||||| || || |||||||| | ||||||||| |||| || || Sbjct 66 GCAGCTCGAGGACGGTCGGACTCTTTCGGATTATAACATCCAGAAGGA 113 >seq68235 Length=344 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178004 AAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAA 178063 ||||||||||||||| || || ||||| || |||||||| || | ||||| || || || Sbjct 1 AAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCTTGATCTTTGCTGGTAA 60 Query 178064 ACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 || ||||| || || | |||||| |||| |||||| | || || || || || || || Sbjct 61 GCAACTCGAGGACGGTCGCACTCTTTCCGACTATAACATTCAGAAGGAGTCCACTCTTCA 120 Query 178124 TCTTG 178128 ||||| Sbjct 121 TCTTG 125 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| || ||||| |||||||| || |||||||| || || Sbjct 207 CAGATCTTTGTCAAGACTCTTACTGGAAAGACGATCACGCTGGAGGTGGAGTCGTCGGAT 266 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || ||||||||||||||| || || ||||| || |||||||| Sbjct 267 ACCATTGACAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 326 Query 178044 CGACTTATCTTCGCCGG 178060 || | ||||| || || Sbjct 327 CGCTTGATCTTTGCTGG 343 >seq14872 Length=27679 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| || || ||||||||||| ||||||||| || ||| Sbjct 25338 CAAATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAATCGTCGGAC 25279 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 ||||| || ||||||||| || || |||||||| ||||| Sbjct 25278 ACCATTGACAACGTCAAAGCCAAAATCCAGGACAAGGAAGG 25238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202360359311496