Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq20 403 2e-107 seq3 152 5e-32 seq12 131 2e-25 seq1 131 2e-25 seq14 100 3e-16 >seq20 Length=206136 Score = 403 bits (446), Expect = 2e-107 Identities = 583/811 (72%), Gaps = 19/811 (2%) Strand=Plus/Plus Query 116630 CCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTG 116689 ||| | || |||| |||||||| ||||| |||| ||||||||||||| ||||||| | Sbjct 117666 CCGCAGATCTGGCAGATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATC 117725 Query 116690 GACCTGTCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGACAACGAGCGCCATTTC 116746 |||| | ||| ||||||||| | ||||||||||||||||| | ||| Sbjct 117726 AACCTCGCGCCTGACCTCCACGACTGGGACAACAAGCTGAACGACAACGAGCGCTACTTC 117785 Query 116747 ATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTC 116806 ||| |||||||||| |||||||||||||| |||||| |||||||||||||| || ||| Sbjct 117786 ATCGAGCACGTGCTCGCCTTTTTCGCCGCGTCCGACGGTATCGTCAACGAGAACCTCGTC 117845 Query 116807 GAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||||| ||| ||||||||| | ||||||| | ||||||||||| |||||| Sbjct 117846 GAGCGCTTCTGCGGTGAGGTGCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATC 117905 Query 116867 GCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCT 116926 ||||||||| | |||||||| | ||| ||| |||||||||||| ||| | || | Sbjct 117906 ATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACCTACATCCG---T 117962 Query 116927 TCGGAGGAGAAGCTCCGTT---TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 | | | || | |||| | ||||||||||| || || ||| |||| || Sbjct 117963 GACAATGCCCGCCGCCAGTACCTGTTCCAGGCCATCGAGACCATTCCCTGCATCAAGAAG 118022 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCT 117042 |||||||| ||||| || ||||||||| | | | || | || | |||||||||||||| Sbjct 118023 AAGGCCGACTGGGCTCTCCGCTGGATCTCGGACC-AGCGTTCGTCGTTCGGCGAGCGCCT 118081 Query 117043 GGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTG 117102 | || ||||| |||||||||||| ||||||| || ||| || || |||| || || Sbjct 118082 TATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTG 118141 Query 117103 GCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGA 117162 ||||||||| || || ||||||||||| || || ||| |||||||||||||| | || Sbjct 118142 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGA 118201 Query 117163 CGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA--TTTGGTGCAGCGACCG 117220 ||||||||| || |||||||||||| |||| |||| ||| || | || || ||| Sbjct 118202 CGAGGGTCTCCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTTCGCCGC--CGCCCG 118259 Query 117221 -AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCT 117279 | | || | || ||| ||||| ||| || |||||| || |||||| ||||| Sbjct 118260 CACCCCGACACG-ATCAACAAGATCATCAAGGAGGCGGTCAAGATTGAGCAGGAGTTCCT 118318 Query 117280 CACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 |||||| || || || || || | || | || || || | |||| || |||| Sbjct 118319 CACCGAGGCCCTCCCCGTCTCGCTCATTGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 118377 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 | ||||| ||||||||| | || || ||| || | | || |||| || ||| || Sbjct 118378 TTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGACAAGGTCTGGAACTCGG 118437 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTC 117429 ||||||| | ||||| ||| | | ||||| Sbjct 118438 CCAACCCCTTCGACTTCATGGAGATGATCTC 118468 >seq3 Length=2330021 Score = 152 bits (168), Expect = 5e-32 Identities = 162/211 (77%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || ||||| ||||| |||||||| |||| ||||| | | Sbjct 19931 AATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTC 19990 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||||| | | | |||| ||||| || |||| ||||| |||||||| || | |||| Sbjct 19991 CGACACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACC 20049 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || |||| |||||||| ||||| || |||| |||||||| |||||||| Sbjct 20050 AGCAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACA 20109 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| | ||||| ||||| || Sbjct 20110 ACATCCAGAAGGAGTCGACGCTCCATCTCGT 20140 Score = 116 bits (128), Expect = 4e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| ||||| || ||||| | || ||||| || | Sbjct 20387 AATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTC 20446 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| | ||| || |||| ||||| |||||||| ||| | |||| Sbjct 20447 GGACACTATCGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACC 20505 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || || |||| || || || |||||||| || | || || ||| ||||||| Sbjct 20506 AGCAGCGCCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGTACGCTCTCGGACTACA 20565 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||| |||| || || || || Sbjct 20566 ACATTCAGAAGGAGTCCACCCTTCACCTCGT 20596 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || ||||| | || || || | | Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| || ||| | ||||| Sbjct 20220 GACACGATCGACAACG-TGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 20278 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | || || || |||||||| |||| ||||| ||| |||||||| Sbjct 20279 GCAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 20338 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| || || || Sbjct 20339 CATCCAGAAGGAGTCGACGCTTCACCTCGT 20368 >seq12 Length=680385 Score = 131 bits (144), Expect = 2e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 || |||||||| |||||||| | || ||||| || |||||| | | | |||| |||| Sbjct 281839 CTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAA 281897 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||| |||||| | |||||||| || ||||||| ||| || Sbjct 281898 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGG 281957 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| |||||||| ||||||||||||||||||||| | || || Sbjct 281958 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 282017 Query 40890 GCATCTAGT 40898 || || || Sbjct 282018 CCACCTTGT 282026 >seq1 Length=4053335 Score = 131 bits (144), Expect = 2e-25 Identities = 144/189 (76%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| || || ||||| || |||| ||||| || | |||| | | | |||| |||| Sbjct 1442302 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1442360 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| |||||||| ||| | |||||||| || ||||||| ||| || Sbjct 1442361 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1442420 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| ||||||||| |||||||||||||||||||||| | || || Sbjct 1442421 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 1442480 Query 40890 GCATCTAGT 40898 || || || Sbjct 1442481 CCACCTCGT 1442489 >seq14 Length=350055 Score = 100 bits (110), Expect = 3e-16 Identities = 274/419 (65%), Gaps = 3/419 (1%) Strand=Plus/Minus Query 116779 CGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGA 116838 |||||| || ||| ||||| || || || ||||| |||||||||| | ||||| Sbjct 103346 CGACGGAATAGTCGGGGAGAACCTCATCTCGCAATTCGCCACGGAGGTGCAGATCGCCGA 103287 Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTC 116898 || || |||||||| ||| |||| || ||| | || || | || | || Sbjct 103286 AGCTCGTGCCTTCTACGCCTTCCAGACGATGATCGAGCAAGTTCATGCCGAGACCTACAG 103227 Query 116899 GACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCAT 116958 ||| ||||| ||||| |||| ||| || ||| | | |||| || | ||| Sbjct 103226 CCTCCTGATCGAGACGTATGTGCAGGACAAGGACGAAAAGGACTTTCTGTTCAAGGGCAT 103167 Query 116959 CGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAG 117018 |||| || || || | | | |||||||| |||||| || | ||| ||| | Sbjct 103166 GGAGAACATCCCTTGTATTCAGAAAAAGGCCGACTGGGCGATGAAGTACATCACCGAC-- 103109 Query 117019 AGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTC 117078 || | | ||| | || ||| | |||||||| ||| || || ||||||| || Sbjct 103108 -GATGTACCTTTCCGGATACGTCTGATCGCCTTCGCTTGCGTTGAAGGTATCTTCTTCTC 103050 Query 117079 GGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTT 117138 || || || || || || ||| | ||||| ||||| |||||| ||| |||| || Sbjct 103049 TGGATCGTTTGCTGCGATCTTCTGGTTGAAGAAGCGCGGTCTCATGGGCGGTTTGACGTT 102990 Query 117139 CAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 | |||||||||||| | |||||||| || || |||||| |||||| || ||| Sbjct 102989 CTCGAACGAGCTCATCAGTCGAGACGAGGGCCTACACACCGACTTCGCCTGTCTGTTGT 102931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218968151360