Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 seq1 114 1e-20 seq12 100 2e-16 >seq3 Length=2330021 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| || ||||| ||||| ||||| Sbjct 20134 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGC 20075 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || || || |||| ||||||||||| |||||||| |||||||||||||| ||| || Sbjct 20074 TTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTC 20015 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | ||||||||||| || | || |||||||| Sbjct 20014 GACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTG 19955 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| |||||||| Sbjct 19954 AGAGTCTTCACAAAGATCTGCAT 19932 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || | || || |||||| ||||| |||||| Sbjct 20584 GTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCA 20525 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || |||||||| || || || |||||||||||||| ||| || || Sbjct 20524 GCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTC 20465 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| | ||||||||| | || | ||| |||||||| || || Sbjct 20464 ACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTC 20405 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 20404 TTGACGAAGATCTGCAT 20388 Score = 104 bits (114), Expect = 2e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||| ||||| ||||||||| | |||||||||||||| |||||||| || ||||||||| Sbjct 19808 TCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTG 19749 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 ||| || || || || | |||| |||||| | ||||||||||| ||| | Sbjct 19748 TCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGACGACTCGACCTCGAGGGTGATG 19689 Query 118704 GTTTTGCCGGTCAGAGTTTT 118723 || |||||||| || || || Sbjct 19688 GTCTTGCCGGTGAGGGTCTT 19669 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||| || | ||||| ||||| ||||| ||||| Sbjct 20356 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCG 20297 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | |||||||||||||| ||||| || || ||||||||||| || || || Sbjct 20296 GCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTC 20237 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||||| ||| ||||| | || | ||| || || || || || Sbjct 20236 ACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTC 20177 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 20176 TTGACGAAGATCTGCAT 20160 >seq1 Length=4053335 Score = 114 bits (126), Expect = 1e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | ||||| ||||||||||| Sbjct 1442484 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 1442425 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || |||||||||||||| || || Sbjct 1442424 CTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1442365 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| | ||||||||||| || | || || ||||| Sbjct 1442364 CGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGT 1442305 Query 118715 CAG 118717 || Sbjct 1442304 GAG 1442302 >seq12 Length=680385 Score = 100 bits (110), Expect = 2e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 282021 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 281962 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| |||||||||||||||| || || || || ||||||||||| || || Sbjct 281961 CTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTT 281902 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | | ||||||||| | || | || ||||| || Sbjct 281901 GGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGT 281842 Query 118715 CAG 118717 ||| Sbjct 281841 CAG 281839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830209656912