Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3 122 1e-22 seq12 91.5 2e-13 seq1 82.4 9e-11 >seq3 Length=2330021 Score = 122 bits (134), Expect = 1e-22 Identities = 147/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| || || |||| || |||||||| || || || Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||||| || | || |||||||||| ||| | || | |||| || Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CG 20006 Query 43111 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | | |||||| ||| || || |||| |||||||| ||||| || || ||||| Sbjct 20005 TTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTC 19946 Query 43170 ACAAAGATTTGCATT 43184 |||||||| |||||| Sbjct 19945 ACAAAGATCTGCATT 19931 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || || || Sbjct 20351 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 20292 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | | |||||||||| ||| || || | ||| Sbjct 20291 AATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCA-CGT 20233 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || || | |||||| || || ||||| || ||||| | Sbjct 20232 TGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGA 20173 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 20172 CGAAGATCTGCAT 20160 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 42950 CTATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTA 43009 ||| |||||||| | | ||| | || | || | ||| |||||| ||||| ||||| Sbjct 20621 CTACTGTCCTCCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTA 20562 Query 43010 ATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || | || || || | || || |||||||| ||||| || || || ||||||||||| Sbjct 20561 GTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTC 20502 Query 43070 GGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCG 43128 | || | || |||||||||| ||| | || | | ||| | | | ||||| | Sbjct 20501 AGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGG 20443 Query 43129 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || || || | |||||| || ||||| || || ||||| || ||||| |||||| Sbjct 20442 ACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 43006 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 43065 |||| |||| || || || |||| || |||||||| |||||||| ||||| ||||||| Sbjct 19831 TGTAGTCAGAAAGCGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCT 19772 Query 43066 GGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 43124 |||||| || | | ||||||||| ||| || |||| ||| | | | ||||| Sbjct 19771 GGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCT 19713 Query 43125 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 ||| || || |||| |||||||| ||||| || || ||||| Sbjct 19712 GACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 19669 >seq12 Length=680385 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| |||||||| Sbjct 282009 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 281950 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 281949 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 281891 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 43162 | | | |||||| || || || || | |||||||| |||||||| || Sbjct 281890 TGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAG 281839 >seq1 Length=4053335 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 1442472 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1442413 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 1442412 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1442365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817342682080