Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 221 3e-52 seq6 118 2e-21 >seq3 Length=2330021 Score = 221 bits (244), Expect = 3e-52 Identities = 631/961 (66%), Gaps = 28/961 (3%) Strand=Plus/Plus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 || |||| |||||| ||| | | || || | ||| | | ||| | |||||| || Sbjct 781077 CTTGACGCCGCGATCATCTATGACCGTGACTTTGCCTACAACTACTTCGGTTTCAAGACC 781136 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 || ||| || || |||||| || || || ||||| | || || ||||||||| Sbjct 781137 CTCGAGCGCTCTTACCTCCTCCGCATCGACGGAAAGATTGCCGAGCGTCCCCAGCACATG 781196 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTAC 248961 | ||||| || | || || || ||| |||||||| |||| || ||||||| ||| Sbjct 781197 CTCATGCGTGTTTCCGTTGGTATCCACGGTGATGACATTGAGAAGGTCATCGAGACCTAC 781256 Query 248962 ACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTACC 249021 | | ||||| || |||| | || || ||| | ||||||||||||||| | || ||| Sbjct 781257 AACCTCATGAGCGAGCGCTACTTCACCCACGCCTCGCCGACGCTCTTCAACTCGGGCACC 781316 Query 249022 GTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGC 249081 | || ||| || || ||||| || | |||||| | || ||||| | ||||| Sbjct 781317 CCCCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCCATGAAGGAGGACTCCATTGACGGT 781376 Query 249082 ATTTATGACACGCTTAAACAGAC---GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGT 249138 || || ||||| || | |||| || |||| || || || || || || ||| Sbjct 781377 ATCTACGACACTCTCA---AGACCTGTGCTCAGATCTCGAAGACTGCCGGTGGTATTGGT 781433 Query 249139 CTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGT 249198 ||| | || |||||| || || ||||| |||||||| || || || || | | Sbjct 781434 CTCCACATCCACAACATTCGTGCCAAGGGCTCGTACATTGCCGGAACCAACGGCTACTCT 781493 Query 249199 GATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCC 249258 | |||||||| ||| | ||||| || || | ||||| | | | | |||||| Sbjct 781494 AACGGTATCGTTCCCATGCTTCGTGCCTACGACGCTACCGCTCGTTACGTTGACCAGGGT 781553 Query 249259 GG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATA 249312 || ||||| ||| | |||||||| || | || ||||||||||| || Sbjct 781554 GGCAACAAGCGCC---CGGGTGCCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACATC 781610 Query 249313 TTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTC 249372 || || ||||||||| | |||||| | || || ||| | | || ||||||||| Sbjct 781611 TTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTTCGTGCCCGTGACCTC 781670 Query 249373 TTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGG 249432 ||||||| ||| ||| |||||||| | |||||| || ||| || | ||||| || ||| Sbjct 781671 TTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAGTCTGACGGTGACTGG 781730 Query 249433 ACGCTTCTTTCTCCGTCCGACGCCCCGGACCTCATCGATCTACACGGCGCCGACTTCGAC 249492 || || | | ||| | || ||| | |||| ||| | ||| || || ||||| Sbjct 781731 ACCCTCATGTGCCCGGCTGAGTGCCCTGGCCTCGCCGACGTCCACTCCGAGGAGTTCGA- 781789 Query 249493 CAAGC-CTATAAGAAATACGAATCCAACGGCATCG---GCAAGACAATCAAGGCTCGGAC 249548 |||| || ||| ||||| ||| | | ||||||| || ||||| | | Sbjct 781790 GAAGCTGTACGAGAGCTACGAGCGTGCCGGTAAGGGTCGCAAGACCATTAAGGCCCAAAA 781849 Query 249549 CCT---TTTTGCGAAGGTGGTGGAGTCCCAGATAGAGACAGGGGGGCCGTATTAT-TTGT 249604 || || || | | | ||| | |||| ||||| || || || | | || | | Sbjct 781850 GCTCTGGTTCGCCA---TCCTTGAGGCTCAGACCGAGACCGGTGGTCCCT-TCATGCTCT 781905 Query 249605 TCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCATCTTGGTACCATCCGCTCGTCAA 249664 ||| ||||| |||| |||| ||||| | ||| || || |||||| ||||| | Sbjct 781906 ACAAGGACGCTGCCAACCGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCGTCGA 781965 Query 249665 ATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGAGGAGATTGCCGTCTGCAACCTGG 249724 | ||||| | ||| | || | ||||||||| || ||| ||||||| |||||||| | Sbjct 781966 ACCTCTGCACTGAGATCATCGAGTACTCGTCCCCTGACGAGGTTGCCGTGTGCAACCTTG 782025 Query 249725 C 249725 | Sbjct 782026 C 782026 >seq6 Length=2095168 Score = 118 bits (130), Expect = 2e-21 Identities = 230/343 (67%), Gaps = 24/343 (7%) Strand=Plus/Minus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || ||||||||||||||||| || ||||| || || || || Sbjct 962823 TGCTCTTCTACGGCCCGCCGGGAACAGGCAAGACGTCCACGATCCTCGCCCTCGCGCGGC 962764 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || || ||| | | | | | |||||||||||||||||| || || ||||| | Sbjct 962763 AGCTCTTCGGCCCCGATCTCTTCAAATCGCGCGTGCTCGAGCTGAATGCGTCCGACGAGC 962704 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATGTCG------- 254180 |||| | ||| ||||| || ||||||||||| || | | ||| | || Sbjct 962703 GCGGCATCTCCGTAGTCCGAGAAAAGATCAAGACGTTTGCGCGCGAGACGCCGCGCCACA 962644 Query 254181 ATTTCGTCGTTCCAACC--------------CGGCTGTCCGCCTTTCAAGCTCGTGATCC 254226 | || ||| | | | | ||| ||||| | ||||||| | |||| Sbjct 962643 ACCCCGGCGTCGCGAGCGATGGCAAGGAGTACCCCTGCCCGCCGTACAAGCTCATCATCC 962584 Query 254227 TGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGA 254286 | ||||||||||||| ||||||| || |||||| || ||| | || | ||||||| Sbjct 962583 TCGACGAGGCGGACAGCATGACGCAGGATGCGCAGAGTGCGCTCAGACGTATCATGGAGA 962524 Query 254287 CGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 || |||| | ||||| || || || ||||||||||| || Sbjct 962523 CGTACTCGCGCATCACGCGGTTCTGTCTCGTGTGCAACTATGT 962481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765904725248