Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 109 4e-19 >seq3 Length=2330021 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || ||||| ||||||||| |||||||||||| ||| ||| |||| || || || Sbjct 20134 TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGC 20075 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || || || || || | ||||| ||||||||||| | |||||||||||| ||| || Sbjct 20074 TTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTC 20015 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| ||| ||||| | || || |||||||| || Sbjct 20014 GACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTG 19955 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 ||||||||||||||||| ||||| Sbjct 19954 AGAGTCTTCACAAAGATCTGCAT 19932 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||| ||||||||| ||||||||||| || ||| |||| ||||| || Sbjct 20363 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTG 20304 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 |||||||| || || | ||||| |||||||| || | ||||||||||||| || || Sbjct 20303 CTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTT 20244 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||||| || |||||||| ||||| Sbjct 20243 CGACTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGT 20184 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 20183 AAGGGTCTTGACGAAGATCTGCAT 20160 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| || ||| ||||||||||||||||||||| || || | || ||||| || Sbjct 20591 GTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTG 20532 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 ||||| || || |||| ||||| ||||| || || | |||||||||||| ||| || Sbjct 20531 CTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTT 20472 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||||| || ||||||||||| || Sbjct 20471 CGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGT 20412 Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| ||||| Sbjct 20411 GAGGGTCTTGACGAAGATCTGCAT 20388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075026660756