Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq3 266 3e-66 seq20 208 7e-49 >seq3 Length=2330021 Score = 266 bits (294), Expect = 3e-66 Identities = 583/864 (67%), Gaps = 12/864 (1%) Strand=Plus/Minus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 |||||||||||||| ||||| ||||| |||||||| ||||| |||||| | || || Sbjct 782035 GCGATCGAGGCAAGGTTGCACACGGCAACCTCGTCAGGGGACGAGTACTCGATGATCTCA 781976 Query 23081 GTACATAGATTGCTAC-ACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGATTGC 23138 || || || || | || |||| || ||||| | | ||| ||||||| || || ||| Sbjct 781975 GTGCAGAGGTT-CGACGACTTGATGGTGCCGAGGT-GCTGCTGGTTGGACTTGCGGTTGG 781918 Query 23139 ACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTC 23198 | ||||||||||||||| | || || |||||| ||| | ||| | ||| || Sbjct 781917 CAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATGGCGA 781858 Query 23199 GCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGG 23257 ||| | | || || | || ||| || ||| || | |||||| | | | Sbjct 781857 ACCAGAGCTTTTGGGCCTTAATG-GTCTTGCGACCCTTACCGGCACGCTCGTAGCTCTCG 781799 Query 23258 TACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317 |||| | || || || | || |||||| ||||| || | | ||| ||| Sbjct 781798 TACAGCTTCTCGAACTCCTCGGAGTGGACGTCGGCGAGGCCAGGGCACTCAGCCGGGCAC 781739 Query 23318 ATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGA 23377 ||||| |||| |||| || || || |||| || || || | ||||| || Sbjct 781738 ATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGG 781679 Query 23378 GCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAA 23437 |||||||| || || ||||| || |||||||| || || |||||| | |||| Sbjct 781678 GCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCATGGTTCTTACGGAGGTCCAGG 781619 Query 23438 AAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTA 23497 ||||| || | ||| || ||||| ||||||||||| | ||| || || ||||| | ||| Sbjct 781618 AAGTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCACCCGGGCGCTTG 781559 Query 23498 TTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGA 23557 ||||| ||||| || |||||||| || || || ||| | | ||||| || |||| | Sbjct 781558 TTGCCACCCTGGTCAACGTAACGAGCGGTAGCGTCGTAGGCACGAAGCATGGGAACGATA 781499 Query 23558 CCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACG 23617 ||||| || |||| || || | ||| || || || |||| |||||| | | Sbjct 781498 CCGTTAGAGTAGCCGTTGGTTCCGGCAATGTACGAGCCCTTGGCACGAATGTTGTGGATG 781439 Query 23618 TGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAG 23677 |||| ||| || || ||| | | ||||| ||| || || || |||||||||||| Sbjct 781438 TGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAG 781379 Query 23678 ATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTG 23737 || || || ||| |||||| || | ||||| | ||| || || ||||| || || | | Sbjct 781378 ATACCGTCAATGGAGTCCTCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTGG 781319 Query 23738 GGCGTAGCGGCCGA---GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATT 23794 || || | |||| ||| || ||||| |||||| || ||||| | | ||| Sbjct 781318 GGGGT---GCCCGAGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATG 781262 Query 23795 AGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGC 23854 || ||||| || |||||| | |||||||| || ||||| ||||| | || || ||| Sbjct 781261 AGGTTGTAGGTCTCGATGACCTTCTCAATGTCATCACCGTGGATACCAACGGAAACACGC 781202 Query 23855 ATCATCATGTATTGAGGTCTCTCG 23878 || | ||||| || || | |||| Sbjct 781201 ATGAGCATGTGCTGGGGACGCTCG 781178 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||| || ||||| || ||||| |||| || || ||||| Sbjct 19932 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 19991 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || ||||||||| Sbjct 19992 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 20051 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||| ||| | || ||| || || ||| || ||| Sbjct 20052 CAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAAC 20111 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| || ||||| || || Sbjct 20112 ATCCAGAAGGAGTCGACGCTCCATCTCGTTCT 20143 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || |||||||| | || ||||| |||| Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| || | || ||||||||| Sbjct 20220 GACACGATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 20279 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || || || ||| |||| ||| || | || || ||| Sbjct 20280 CAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 20339 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || ||||| ||||| || || ||| | ||| | || || Sbjct 20340 ATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGG 20386 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| |||||||| | || || || | || Sbjct 20388 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTCG 20447 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | || || || || ||||||||| ||| | || || |||||| Sbjct 20448 GACACTATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 20507 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||||| || || || ||||| || ||| |||| || | | | || | || || || Sbjct 20508 CAGCGCCTGATCTTTGCTGGAAAGCAGCTGGAGGA-TGGACGTACGCTCTCGGACTACAA 20566 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||| || || || || ||||| || || ||| Sbjct 20567 CATTCAGAAGGAGTCCACCCTTCACCTCGTCCTT 20600 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 31208 AAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACG 31267 ||||| || || ||||| || |||||| |||| || || |||| |||| |||| | Sbjct 19669 AAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCAGACACCATCGACAAC 19728 Query 31268 GTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTC 31327 ||||| || || |||||||| || | || ||||||||||||||||| || ||| Sbjct 19729 GTCAAGTCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGACCAGCAGCGTCTCATTTTC 19788 Query 31328 GCTGGCAAACAGTTGGAAGAC 31348 ||||| || ||| | || ||| Sbjct 19789 GCTGGAAAGCAGCTTGAGGAC 19809 >seq20 Length=206136 Score = 208 bits (230), Expect = 7e-49 Identities = 554/834 (66%), Gaps = 23/834 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| | || ||||| ||||||| ||| || | |||| Sbjct 117672 ATCTGGCAGATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTC 117731 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 | || || ||| ||||| | || || || ||| | | || || | Sbjct 117732 GCGCCTGACCTCCACGACTGGGACAACAAGCTGAACGACAACGAGCGCTACTTCATCGAG 117791 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || ||||||||||| ||||| ||||| || |||||||| | ||||| | Sbjct 117792 CACGTGCTCGCCTTTTTCGCCGCGTCCGACGGTATCGTCAACGAGAACCTCGTCGAGCGC 117851 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGA-GATGCTTTTACGGATTTCAAGTGGCCAT 57805 || | || ||||| | | ||||| | || | || ||||| || || | || Sbjct 117852 TTCTGCGGTGAGGTGCAGATCTCCGAGGCCAAGACG-TTCTACGGCTTCCAGATCATGAT 117910 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAA--- 57862 || ||| | || || || | ||| ||||| |||||||| || ||| | ||||| Sbjct 117911 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACCTACATCCGTGACAATGC 117970 Query 57863 -CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGG 57921 || || | ||| |||||| | || ||||| || || ||| ||| ||||||| Sbjct 117971 CCGCCGCCA---GTAC-CTGTTCCAGGCCATCGAGACCATTCCCTGCATCAAGAAGAAGG 118026 Query 57922 CAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG--CCACGTTCGCCGAGAGGCTAAT 57979 | || ||| | || ||||| | ||| | | |||||| |||| | || || Sbjct 118027 CCGACTGGGCTCTCCGCTGGATCTC--GGACCAGCGTTCGTCGTTCGGCGAGCGCCTTAT 118084 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 ||| ||||| |||||||| || || ||||| || ||| |||||| | || || ||| | Sbjct 118085 CGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTGGCT 118144 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| || || || |||||||| || || || |||||| | || ||||||||||| Sbjct 118145 CAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGACGA 118204 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG-ACGC 58158 ||||||||| || || ||||| ||||| | | | | ||| || | ||| || | Sbjct 118205 GGGTCTCCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTTCGCCGCCGCCCGCACCC 118264 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 | || ||| | || |||| ||||||||| ||| || | ||||| |||||| Sbjct 118265 CGACACG-ATCAACAAGATCATCAAGGAGGCGGTCAAGATTGAGCAGGAGTTCCTCACCG 118323 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | ||||| || || | | | || |||||| | | |||| |||||||||||| Sbjct 118324 AGGCCCTCCCCGTCTCGCTCATTGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGT 118383 Query 58279 TTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAAA 58336 |||| |||||| | || | ||| || | || | ||| | ||| || || Sbjct 118384 TTGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGACAAGGTC--TGGAACTCGGCCAA 118441 Query 58337 TCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || || || ||| | ||||||||||| |||||||| | ||||||||||| Sbjct 118442 CCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGA 118495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766199405120