Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=2330021 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | || | ||| ||||| || || ||||| || ||| | Sbjct 20158 CCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20099 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| || ||||| || || ||| |||| ||||| ||||| |||||||| Sbjct 20098 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGA 20039 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| ||| | || | || | | || | ||||||| | ||| || Sbjct 20038 ATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGAC 19980 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | ||||||||||| | || || || || || ||||| Sbjct 19979 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 19932 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || || || || | ||| | || | ||||| || ||||| || |||||||| || || Sbjct 20617 TGTCCTCCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCC 20558 Query 139595 CTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 139653 | || | || | || || ||||| || |||||| ||||||| || ||||| || || Sbjct 20557 GAGAGCGTACGTCCA-TCCTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGG 20499 Query 139654 AGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCT 139712 || ||||| || ||||| ||| | || | || | | || | ||||| | || || Sbjct 20498 GGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACT 20440 Query 139713 CCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | ||||| | || | |||||||||||| | || || ||||| || ||||| Sbjct 20439 CGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 20388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063776771200