Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq20 223 5e-53 seq3 120 5e-22 seq1 104 3e-17 seq14 89.7 8e-13 >seq20 Length=206136 Score = 223 bits (246), Expect = 5e-53 Identities = 563/844 (67%), Gaps = 29/844 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||||||| || ||||| | ||| ||| || | || Sbjct 117672 ATCTGGCAGATGTACAAGAAGGCGCAGGCCTCGTTCTGGACCGCCGAGGAGATCAACCTC 117731 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 | ||||| |||| ||||| | ||| || | ||||| | || || | Sbjct 117732 GCGCCTGACCTCCACGACTGGGACAACAAGCTGAACGACAACGAGCGCTACTTCATCGAG 117791 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | ||||| || |||| ||||| || ||||||||||| || || || || || Sbjct 117792 CACGTGCTCGCCTTTTTCGCCGCGTCCGACGGTATCGTCAACGAGAACCTCGTCGAG-CG 117850 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 |||| ||| || || | |||| | || ||||| ||||| |||||||| Sbjct 117851 CTTCTGCGGTGAGGTGCAGATCTCCGAGGCCAAGACGTTCTACGGCTTCCAGATCATGAT 117910 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TCC 125314 |||||| | |||||||| | |||||| || || |||| ||||| || || | | Sbjct 117911 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACCTACATCCGTGACAATGC 117970 Query 125315 GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 | || | || || || | || ||||| || | || | || || ||||| Sbjct 117971 CCGCCGCCAGTACCTGTTCC---AGGCCATCGAGACCATTCCCTGCATCAAGAAGAAGGC 118027 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| ||| | || |||| || ||| | || | || Sbjct 118028 CGACTGGGCTCTCCGCTGGATCTCGGACCAGCGTTCGTCGTTCGGCGAGCGCCTTATCGC 118087 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 ||||| ||||| |||||||||||||| || || |||||| ||||||| |||||||| Sbjct 118088 TTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTGGCTCAA 118147 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || ||||||||||| || || | |||||| | || || || |||||||| Sbjct 118148 GAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGACGAGGG 118207 Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGAT 125613 || ||| ||||||||| || || || |||| || || || ||| ||| Sbjct 118208 TCTCCACACCGACTTTGCCTGCCTGCTCTTCACGCACCT-TCGCCG--CCGCCCGCACCC 118264 Query 125614 CCA-GCGATGAA-AAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTT 125671 | | |||| || ||| ||||||| || || || | ||| || || ||||| Sbjct 118265 CGACACGATCAACAAGATCATCAA---------GGAGGCGGTCAAGATTGAGCAGGAGTT 118315 Query 125672 TCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731 || ||||| |||| || ||| | |||||||||||| |||||| |||||| |||| Sbjct 118316 CCTCACCGAGGCCCTCCCCGTCTCGCTCATTGGCATGAACGCCAAGCTCATGTGCCAGTA 118375 Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAA 125788 ||| |||||||| || || || || || || | ||| || |||| | | || Sbjct 118376 CATTGAGTTTGTCGCCGACCGCCTCCT---CGTCGCCCTCGGCAACGACAAGGTCTGGAA 118432 Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848 | | || ||||| || |||||| | || || || |||| ||| |||||||||| Sbjct 118433 CTCGGCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTT 118492 Query 125849 CGAG 125852 |||| Sbjct 118493 CGAG 118496 >seq3 Length=2330021 Score = 120 bits (132), Expect = 5e-22 Identities = 336/514 (65%), Gaps = 14/514 (3%) Strand=Plus/Plus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| ||||| || || || || || | ||| ||||| | || || Sbjct 781536 CGTTACGTTGACCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCCATCTACCTCGAGCCC 781595 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||| | || ||||| | || | || || ||| ||| || |||| Sbjct 781596 TGGCACGCCGACATCTTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTT 781655 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA- 97042 || ||| | ||| | || || || |||||| | | || | ||||||||||| ||| | Sbjct 781656 CGTGCCCGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 781715 Query 97043 --CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 ||||||| |||||| ||| |||||||| | || || || || |||| | Sbjct 781716 TCTGACGGTG---ACTGGACCCTCATGTGCCCGGCTGAGTGCCCTGGCCTCGCCGACGTC 781772 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGA 97160 ||| ||||| ||| |||| | |||||||| | |||| || | | Sbjct 781773 CACTCCGAGGAGTTCGAGAAGCTGTACGAGAGCTACGAGC----GTGCCGGTAAGGGTCG 781828 Query 97161 CGAGTCGAT----GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 | || | || || | | | || ||| |||||| | ||||||| ||||| || Sbjct 781829 CAAGACCATTAAGGCCCAAAAGCTCTGGTTCGCCATCCTTGAGGCTCAGACCGAGACCGG 781888 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 ||| | ||| ||||||||||| | | || ||||| |||||| | ||| | || Sbjct 781889 TGGTCCCTTCATGCTCTACAAGGACGCTGCCAACCGCAAGTCCAACCAGCAGCACCTCGG 781948 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 |||||||||| || || || ||||| || || | |||||| | || || |||||| Sbjct 781949 CACCATCAAGTCGTCGAACCTCTGCACTGAGATCATCGAGTACTCGTCCCCTGACGAGGT 782008 Query 97337 GGCAGTTTGCGTTCTGGCATCGGTCAATCTGCCC 97370 || || ||| || || ||| || ||| ||| Sbjct 782009 TGCCGTGTGCAACCTTGCCTCGATCGCTCTCCCC 782042 >seq1 Length=4053335 Score = 104 bits (114), Expect = 3e-17 Identities = 400/616 (65%), Gaps = 28/616 (5%) Strand=Plus/Plus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||| | ||||||| || || || || || | ||| |||||||| || || ||||| Sbjct 3052678 TTGCGGAAGAAGATGAGACCAGCACGGGGGCCACGGAGGGTCTTGTGGGTGGTGGTGGTG 3052737 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGC--CCGCAATCAAGCCCGCAA 127219 || | |||||| || || ||||| | || || || || | |||| | |||| || Sbjct 3052738 ACGACGTCACAGTAGTCGAAGGG-CGAGTTCTG-CTCGGCGGCAGCAACGAGACCCGAAA 3052795 Query 127220 TGTGTGCAATATCGGCCATCAGCAAGG-AGCCGGCTGCATCGGCAATCTCTCGGAATCGT 127278 |||| || || |||| |||||| ||| | || ||| ||||| ||||| |||| || | Sbjct 3052796 TGTGGGCCATGTCGGACATCAGGTAGGCACCCTGCTTG-TCGGCGATCTCGCGGA-TCTT 3052853 Query 127279 CTA-TAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCT---ATGATTAGCCTAGGTTT 127334 || |||||| || || || || | || ||| | | || || | || || Sbjct 3052854 CTTGTAGTCCCAGTCACGGGGGTA---AGCGGAGCCACCGCAGACGACGAGACGGGGCTT 3052910 Query 127335 GAATAGATTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCAC 127394 ||| | ||||| | | || | | ||||| ||| || ||||| || || || Sbjct 3052911 GAAGATGTTGGCGTTGGTCGAGAGCTGCTCGTAGTCAACGTAGCCGGTCTGGGGGTCGAC 3052970 Query 127395 CTTGTACGGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACGTT-------GCGGAAT- 127446 ||| || | | ||| ||| || | |||| | || |||| | Sbjct 3052971 ACGGTAAGGGAACGACTGGAAGTAGATCGACGAGGCGGTGATCTTCTTCTTGGCGGTGTA 3053030 Query 127447 ----CCGTGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGG 127502 ||||| || |||||||| |||||||| ||| |||| ||||||| | | || || Sbjct 3053031 GTAACCGTGGGTAAGGTGGCCACCGTCGGGGAGACCGAGACCCATGACACGGTCCTGGGG 3053090 Query 127503 TTTAACGATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACA 127562 || | || ||||| | | ||||||||||| |||| || ||||| || || || Sbjct 3053091 GTTGATGAGGGCAGTGAAAGCAGCAAAGTTGGCAGTCGAACCAGAGTAGGGCTGGACGTT 3053150 Query 127563 CACTCCCCATTCGGACTCGTTCAA-ATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCA 127621 || ||||| | || | | |||| |||||| || |||| |||| | | || Sbjct 3053151 GACGCCCCACTTGG-CGGGGTCAAGATTGAAGGCCTTGAGGGCACGCTCGCGGGTGAGGT 3053209 Query 127622 GTTCGATGCGATCGATAAACTCGTTACCACCATAGTATCGCTTTCCGGGCCTACCCTCCG 127681 |||| | || || ||||||||||||| ||||| || ||||| |||||| | Sbjct 3053210 TCTCGAGCTGGTCAATGTACTCGTTACCACCGTAGTAACGGGCACCGGGGAGACCCTCAG 3053269 Query 127682 AGTACTTGTTGATGAG 127697 ||||||||||| |||| Sbjct 3053270 AGTACTTGTTGGTGAG 3053285 >seq14 Length=350055 Score = 89.7 bits (98), Expect = 8e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||| | || ||||| ||| || || |||||||| || || ||||| || ||||| Sbjct 103087 CTGATCGCCTTCGCTTGCGTTGAAGGTATCTTCTTCTCTGGATCGTTTGCTGCGATCTTC 103028 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||| | ||||||||||| |||||| ||| ||||| | |||||| | || |||| Sbjct 103027 TGGTTGAAGAAGCGCGGTCTCATGGGCGGTTTGACGTTCTCGAACGAGCTCATCAGTCGA 102968 Query 125547 GACGAGGGCCTACACTGTGACTTTGCC 125573 ||||||||||||||| ||||| ||| Sbjct 102967 GACGAGGGCCTACACACCGACTTCGCC 102941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058866523360