Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 109 1e-18 seq14 86.0 1e-11 >seq3 Length=2330021 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| || || || | ||||| Sbjct 20143 AGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 20084 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || || | ||| || || ||||| || || || || ||| Sbjct 20083 TCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 20024 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| | || || || || | ||| ||| | || ||||| || || || ||| Sbjct 20023 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 19964 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || || || || || || ||||| ||||||||| Sbjct 19963 TTGCCGGTGAGAGTCTTCACAAAGATCTGCATT 19931 Score = 105 bits (116), Expect = 2e-17 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || |||||||| || ||||| || || || | || || Sbjct 20600 AAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATC 20541 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || ||||||||||| || || | ||| || ||||| || || || || || || Sbjct 20540 CTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 20481 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAG 104525 ||||||||| | || || || || | || || | ||| || ||||| || || || | Sbjct 20480 CTGAATCTTCGACTTCACGTTGTCGATAGTGTC-CGAGGACTCGACCTCCAGCGTGATCG 20422 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||| || || || || || || || ||||||||| Sbjct 20421 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 >seq14 Length=350055 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 269153 GTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGC 269212 || |||||||| ||||| || || || ||||| || ||||| ||||||||||| | || Sbjct 103069 GTTGAAGGTATCTTCTTCTCTGGATCGTTTGCTGCGATCTTCTGGTTGAAGAAGCGCGGT 103010 Query 269213 CTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGC 269272 || ||| || || || ||||| ||||| | || || | ||||| || ||||| | Sbjct 103009 CTCATGGGCGGTTTGACGTTCTCGAACGAGCTCATCAGTCGAGACGAGGGCCTACACACC 102950 Query 269273 GACTTCGCTTGT 269284 |||||||| ||| Sbjct 102949 GACTTCGCCTGT 102938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397868917488