Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq8 100 2e-16 seq2 84.2 2e-11 >seq8 Length=1160105 Score = 100 bits (110), Expect = 2e-16 Identities = 223/324 (69%), Gaps = 12/324 (4%) Strand=Plus/Minus Query 5584 CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCGTTGTGGCCGA 5642 |||| ||||| ||| || || || || ||| || || |||| ||| || | | ||| | Sbjct 630067 CTCGAGGATCAACTGGGCAATGCGATC-CCCTTCGTTGACCTTGAACTCCTCATCGCCCA 630009 Query 5643 AGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCA 5702 |||||||| | || | |||||| |||||||| || ||||||||||||||| Sbjct 630008 GATTGAACAGGATGACTTTGAGCGGGCCGCGATAGTCGGCATCGATCACGCCCGCGCCCG 629949 Query 5703 CGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA-GCACCCA 5761 || |||| |||||||| | || || || || ||||| || |||||||| || | ||| Sbjct 629948 TGTGGATGGAGTGCTTGGCTGCGAGCCCCGAACGGGGGGCTACGCGGCCATATGTGCCCG 629889 Query 5762 TCGGGAAGCTGTATCTGCAGGTCCGTGAACACCACTCGCCGACCGCCCGCAGGGAC-GAT 5820 |||| | | || | ||||||| ||||| | |||| || ||| || || Sbjct 629888 ATGGGAGGGCG-ATGGAGATGTCCGTGTCCACCATTGCTTTTCCGCGCGGAGGCACAGAG 629830 Query 5821 GC-AGTCGCAAGCGCTGCAGAGGTCGTACCCGGCCGCCCGCGGGGAC--CCCCTGGTGGG 5877 || |||| || | | | |||||| ||||||| | || ||| || || | ||||| Sbjct 629829 GCGGGTCG--AGAGGCGTACAGGTCGAACCCGGCTG--CGAGGGCACTGCCGCGCGTGGG 629774 Query 5878 GAGCGTGGCGTTGGGGGACAGGCG 5901 || ||||||| ||||| ||||| Sbjct 629773 GATCGTGGCGGAGGGGGCGAGGCG 629750 >seq2 Length=2838010 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 |||||| || || || || | ||||||||||||| ||| | ||||| ||||| || Sbjct 319056 GTTGAAGAGGACGACCTTGACCTCGCCGCGGTAGTCGCAGTCGACGACGCCGGCGCCGAC 319115 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 ||||||| ||||||| | |||||||| ||||| || || | ||| ||||| Sbjct 319116 GTCGATGCCGTGCTTGGCGGCCAGGCCCGAGCGCGGCGCGATGCGTCCGTA 319166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054211313632