Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 3e-15 >seq3 Length=2330021 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || | || || ||||||| |||||||| || | | Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | ||||||||| || || | | ||||||||| ||| ||| ||||| | Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTT 20004 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || ||||| |||| ||||| ||||| || ||||| || ||||||||||| ||| Sbjct 20003 GTCG--ATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTC 19946 Query 48713 ACAAAAATCTGCAT 48726 ||||| |||||||| Sbjct 19945 ACAAAGATCTGCAT 19932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251015176036