Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 168 1e-37 seq3 165 1e-36 >seq1 Length=4053335 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| |||||||||||||| ||||| |||||||| Sbjct 361290 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATCCGTCGTCTTGCTCGCCGTGGTGGT 361231 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| ||||||| | |||| || |||| ||| | ||| | |||||||||||| Sbjct 361230 GTCAAGCGTATCTCTGGTCTCATCTACGAGGAGACTCGCGGTGTCCTCAAGATCTTCCTC 361171 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| || | || ||| || |||||||| || || |||||||| ||| Sbjct 361170 GAGAACGTCATCCGCGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACTGTTACC 361111 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | || ||||||| || | || || || ||||| | | || ||||| || Sbjct 361110 TCGCTCGACGTCGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGG 361055 >seq3 Length=2330021 Score = 165 bits (182), Expect = 1e-36 Identities = 180/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || || |||||||| |||||||| ||||| ||||| |||||| Sbjct 1938642 CTGCGTGACAACATCCAGGGTATTACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGT 1938583 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| |||| || | ||||||| |||| |||| ||| | ||||||||| Sbjct 1938582 GGTGTCAAGCGTATCTCCGGCCTCATCTATGAGGAGACCCGTGGTGTCCTCAAGATCTTC 1938523 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| |||| ||| | || ||| || |||||||| || || ||||| ||| Sbjct 1938522 CTCGAGAACGTCATCCGTGACTCGGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTC 1938463 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||||| | || ||||||| || | || || || ||||| | | || ||||| || Sbjct 1938462 ACCTCGCTCGACGTCGTCTACGCCCTCAAGCGCCAGGGCCGCACCCTCTACGGTTTCGG 1938404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075167084948