Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq1 129 6e-25 seq20 118 1e-21 seq12 114 1e-20 >seq3 Length=2330021 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | ||| | ||||||||||| || |||||||| ||| | Sbjct 20158 CCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20099 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | |||||||||||| ||||| Sbjct 20098 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGA 20039 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 20038 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACC 19979 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| ||||| || || || |||||||| Sbjct 19978 TCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 19932 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| || |||||||| || Sbjct 20386 CCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 20327 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| || || | || | |||||||||||| || || Sbjct 20326 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGA 20267 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||| | Sbjct 20266 ATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTCAACC 20207 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || ||||| || || || || ||||| |||||||| Sbjct 20206 TCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 20160 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| |||||||| ||||||||||| || Sbjct 20614 CCTCCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAG 20555 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||| || || |||| | ||||||||||| || || Sbjct 20554 AGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGA 20495 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||| | | || | ||| || | |||||||| Sbjct 20494 ATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACC 20435 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || ||||| |||||||| Sbjct 20434 TCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 20388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 |||||| |||||||| || ||| | || | |||||||||||| |||||||| || || || Sbjct 19809 GTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTT 19750 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| ||| ||||| | || | || || | ||||||| |||| ||| | Sbjct 19749 GTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGACGACTCGACCTCGAGGGTGAT 19690 Query 131199 GGTTTTACCGGTTAGAGTTTT 131219 ||| || ||||| || || || Sbjct 19689 GGTCTTGCCGGTGAGGGTCTT 19669 >seq1 Length=4053335 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | |||||||||||| || |||||||| ||| Sbjct 1442507 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 1442448 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 1442447 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGA 1442388 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | |||||||| Sbjct 1442387 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 1442328 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 |||| |||| ||| |||||||| || Sbjct 1442327 TCGAGAGTAATGGTCTTACCGGTGAG 1442302 >seq20 Length=206136 Score = 118 bits (130), Expect = 1e-21 Identities = 279/413 (68%), Gaps = 9/413 (2%) Strand=Plus/Plus Query 46177 GTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGG 46235 || |||||| |||| || |||||| ||||| ||||||| | |||| || | || Sbjct 118098 GTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGT 118157 Query 46236 CATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATAC 46295 | |||||||||| || || || |||||||| || |||||||||||||| || || || Sbjct 118158 C-TCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGACGAGGGTCTCCACAC 118216 Query 46296 GGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGC-GCCCGACACCG 46354 |||||||| || || || ||| | | | | | | || || |||||||| Sbjct 118217 CGACTTTGCCTGCCTGCTCT---TCACGCACCTTCGCCGC-CGCCCGCACCCCGACACGA 118272 Query 46355 TGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGC 46414 | | || ||||||||||||| |||||| ||||||| | || | || || | Sbjct 118273 TCAACAAGATCATCAAGGAGGCGGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTCC 118332 Query 46415 CCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGG 46474 ||| | || | ||||||||||| || |||||| | ||||| |||||||| || | Sbjct 118333 CCGTCTCGCTCATTGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCG 118392 Query 46475 ACCGACTGCTCGTGCAGCTTCACCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGAG 46533 |||| || ||||| | | || || | ||| | || || ||| || || || Sbjct 118393 ACCGCCTCCTCGT-CGCCCTCGGCAACGACAAGGTCTGGAACTCGGCCAACCCCTTCGAC 118451 Query 46534 TTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGT 46586 || ||| | | ||||| || ||||||| | || |||||||| |||||| Sbjct 118452 TTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGAGTCGCGCGT 118504 >seq12 Length=680385 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | |||||||||||| || |||||||| || Sbjct 282044 CCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 281985 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||| Sbjct 281984 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGG 281925 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||||| Sbjct 281924 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 281865 Query 131188 TCGACGGTAACGGTTTTACCGGTTAG 131213 || | || | ||| || || || || Sbjct 281864 TCAAGAGTGATGGTCTTGCCCGTCAG 281839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012587594240