Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 136 3e-27 seq1 111 1e-19 seq12 98.7 8e-16 seq20 84.2 2e-11 >seq3 Length=2330021 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | ||||| || || ||||||| || || || | || Sbjct 19932 ATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCC 19991 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| ||||| ||||| || Sbjct 19992 GACACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACCAG 20051 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||| ||||| ||| | ||||| ||||||| | ||||| |||||| Sbjct 20052 CAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAAC 20111 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | ||| | || | ||||| ||| Sbjct 20112 ATCCAGAAGGAGTCGACGCTCCATCTCGTTCTCCGTCTCCGCGGTGGT 20159 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || ||||| ||| |||| || || || || | | Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||||||||| ||||| || Sbjct 20220 GACACGATCGACAACGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 20279 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || |||||||| || ||| | ||||| |||||| |||| || |||||| Sbjct 20280 CAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAAC 20339 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 20340 ATCCAGAAGGAGTCGAC 20356 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || ||| |||| || || || || || | Sbjct 20388 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTCG 20447 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||| ||||| || || || Sbjct 20448 GACACTATCGACAACGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 20507 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||| || || ||| | |||||| || || |||| || |||||| Sbjct 20508 CAGCGCCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGTACGCTCTCGGACTACAAC 20567 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 20568 ATTCAGAAGGAGTCCACC 20585 >seq1 Length=4053335 Score = 111 bits (122), Expect = 1e-19 Identities = 129/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 |||||||| || | ||||| || || || || | || ||| | ||| | |||| Sbjct 1442305 ACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAGTCG 1442364 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| ||||| || || ||||| || || |||||||| Sbjct 1442365 AAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGCAAG 1442424 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| ||||||| |||||||| || || || || ||| Sbjct 1442425 CAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACC 1442478 >seq12 Length=680385 Score = 98.7 bits (108), Expect = 8e-16 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||||||||| || || || |||| ||| | ||| | |||| Sbjct 281842 ACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 281901 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || |||||||||||||| || || || || || ||||| || || || ||||| Sbjct 281902 AAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGGCAAG 281961 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | ||||| ||||||| | || || |||||||| || || || || ||| Sbjct 281962 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACC 282015 >seq20 Length=206136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 117056 GCGA-CGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTG 117114 |||| ||| | ||||||||||| ||||| ||||| ||||| || ||| ||||| Sbjct 118072 GCGAGCGCCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGT 118131 Query 117115 CCATATTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAA 117174 |||| || | |||||| ||||| ||||| ||||| || || ||||| | | Sbjct 118132 CCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCA 118191 Query 117175 TATCGCGTGACGAAGGTTTACACACCGATTTTGCGTGCATG 117215 | ||||| ||||| ||| | |||||||| ||||| ||| || Sbjct 118192 TCTCGCGCGACGAGGGTCTCCACACCGACTTTGCCTGCCTG 118232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727815844340