Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 113 9e-20 seq9 111 3e-19 seq20 100 6e-16 seq3 87.8 4e-12 >seq1 Length=4053335 Score = 113 bits (124), Expect = 9e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || || || ||||| || ||||| || || ||||| || |||||||||||||| | || Sbjct 1254134 GGCCCGAACGGTGCCGGAAAGTCGACGCTCATCAAGCTCATGACTGGCGAGACCATGCCC 1254075 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 ||||| ||||| ||||| ||| | || | | ||||||||| ||||||||| Sbjct 1254074 CAGGAGGGTTCCGTGCACAAGCACCCCGCTCTCCGTGTCGGTTACGTCGCCCAGCACGCT 1254015 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTAT 280358 |||||||||||| | | || || |||| ||| || ||| ||||| |||||||| ||| Sbjct 1254014 TTCCACCACATCAACGAGCATCTCGACAAGACCGCTGTCCAGTACATCCAGTGGCGTTAT 1253955 Score = 96.9 bits (106), Expect = 7e-15 Identities = 176/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761 || || || |||||||||||||||||||| | || | |||| || || | || Sbjct 1254611 TCGCTCTCCGGTGGTTGGAAGATGAAGCTCGAGCTTGCCCGCGGTATGCTTGTCAACCCC 1254552 Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821 || | || || || |||||||| ||||||||| ||||| | | || || ||||| Sbjct 1254551 GACATTCTGCTCCTCGATGAGCCTACCAACCACTTGGACGTCCAGACTGTCGCTTGGCTC 1254492 Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881 | | |||||| | || || ||| | | | | | |||||||| ||||||||||| Sbjct 1254491 GAGGACTACCTCAACAACCTCAAGGGCATCACCTGCATGATTGTCTCGCACGACTCTGGT 1254432 Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941 ||||| || ||| || | | |||||| ||||| ||||| || |||||| | | Sbjct 1254431 TTCCTTGACAACGTTTGTACCGACATCATCCACTACGAGCAGAA---GAAGCTTGTCTAC 1254375 Query 279942 CACATCGGCAACCTGTC 279958 || ||||||||| || Sbjct 1254374 TACCCCGGCAACCTCTC 1254358 >seq9 Length=833167 Score = 111 bits (122), Expect = 3e-19 Identities = 135/182 (74%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| || |||||||||| ||||| |||| | || || ||||||||| || || Sbjct 39363 GGTCCCAACGGATCGGGTAAGTCGACCCTCGTCAAGCTTCTTACCGGCGAGACCGAGCCC 39422 Query 280239 ACTGAGGG--GT-CCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | | || || |||| |||||||| || ||| | || | ||||||||| |||||| Sbjct 39423 AACGTTGGCGGTACCGTCTGGAAGCACCCTAACCTTGTCATCGGTTACGTCGCCCAGCAC 39482 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| | ||||| ||| ||||||| | | ||||| | ||||| Sbjct 39483 GCCTTCCACCACATCGACCAGCACCTCGACTCGACTCCTCTCGAGTACATGCTCTGGCGT 39542 Query 280356 TA 280357 || Sbjct 39543 TA 39544 >seq20 Length=206136 Score = 100 bits (110), Expect = 6e-16 Identities = 288/435 (66%), Gaps = 6/435 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | |||||||| || ||||| | ||||||||||||||||||||| | Sbjct 118495 TCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGCC 118436 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | || | |||| | ||| || || |||| || |||||| || |||||||| | Sbjct 118435 GAGTTCCAGACCTTGTCGTTGCCGAGGGCGACGAGGAGGCGGTCGGCGACAAACTCAATG 118376 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACA-AGGAATTGCCTCACAGAT 251741 ||||| | ||| || | | |||||||||||| | ||| | || | ||||| || Sbjct 118375 TACTGGCACATGAGCTTGGCGTTCATGCCAATGA-GCGAGACGGGGAGGGCCTCGGTGAG 118317 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAG-ACA 251800 ||| |||| || | || ||||||| | || || | | ||| | | | | Sbjct 118316 GAACTCCTGCTCAATCTTGACCGCCTCCTTGATGATCTTGTTGATC-GTGTCGGGGTGCG 118258 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | | || | | | | || || | |||| | ||| ||||||||||||| Sbjct 118257 GGCGGCGGCGAAGGTGCGTGAAGAGCAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCGC 118198 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||| |||||| || | || || ||||| | ||||| ||| ||||||||| Sbjct 118197 GCGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 118138 Query 251921 AGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGG 251979 |||| | ||| ||| || |||||||| | | |||||||| | | || | |||| Sbjct 118137 AGATGGACGC-AAACGAGCCAGAGAAGAAGATGCCCTCGACGGCAGCGAAAGCGATAAGG 118079 Query 251980 CGCTCAGCAAACGAC 251994 ||||| | |||||| Sbjct 118078 CGCTCGCCGAACGAC 118064 >seq3 Length=2330021 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||||| ||| |||| || || ||||| || ||||||||||| || || | |||| || Sbjct 782807 CTGCGACTGGTCGATGAACGCTCCACGGTCGGCAGCGAGGTCGATAACCGCCTTCTGCGA 782748 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGA---CATCAGGATGAATGCCAATAACCTT 293231 ||||||||| |||||||| | ||||||| |||||||| || ||| | Sbjct 782747 GATCTCCCAGACAGTCTTGTAAATGGCCTTGATGTCATCAGGAATGTTGGGGATA---TG 782691 Query 293232 CTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACG 293291 |||||| || || ||| ||||| || |||||||||| |||| |||| | || | Sbjct 782690 CTGGATGGAGCCACCGGAAGCAATGATGAGGTTCTTCATCTCCTCGTCCCAAATTCCGAG 782631 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAG 293341 || | ||||| | ||| | | | |||||| | ||| ||||||| Sbjct 782630 GTTGATCAAGTCGCGAAGAAGCCAGGGGCAGACAACCGCGAAGTCACCAG 782581 Score = 86.0 bits (94), Expect = 1e-11 Identities = 242/368 (66%), Gaps = 13/368 (4%) Strand=Plus/Minus Query 294151 AGGCCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTC 294210 |||||||||||||| ||| | || | ||| | | |||| ||| || |||||| Sbjct 781762 AGGCCAGGGCACTCAGCCGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTC 781703 Query 294211 ATGAATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCA 294270 ||||| || || || ||| | ||||| || | || ||||| || | ||||| Sbjct 781702 ATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTT 781643 Query 294271 CCTTGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATAC 294330 || || || ||||||| ||||||||| | |||||||| || ||| || || || Sbjct 781642 CCATGGTTCTTACGGAGGTCCAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAG 781583 Query 294331 ACAGCAAAGG-ACCC-----CTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTG 294384 | || |||| |||| ||| || || ||||||| |||| || || | | Sbjct 781582 ATGGCGAAGGCACCCGGGCGCTTGTTG---CCACCCTGGTCAACGTAACGAGCGGTAGCG 781526 Query 294385 TCAAACACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCT-- 294442 || | | ||||| || ||||| || | || | || ||||||||| ||| | Sbjct 781525 TCGTAGGCACGAAGCATGGGAACGATACCGTTAGAGTAGCCGTTGGTTCCGGCAATGTAC 781466 Query 294443 CAGCCCCGCGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGACA 294502 ||||| | | ||||||| | |||||||||||||| |||||| || ||| || | Sbjct 781465 GAGCCCTTGG--CACGAATGTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGA 781408 Query 294503 ACTGGGCA 294510 ||| ||| Sbjct 781407 TCTGAGCA 781400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836325910276