Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq3 147 5e-30 >seq3 Length=2330021 Score = 147 bits (162), Expect = 5e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | ||| ||||| |||| ||| || || || || || ||||| Sbjct 20617 TGTCCTCCACGGAGACGAAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCC 20558 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | |||||| ||||| || || | || ||||| || |||||||| ||||| || | Sbjct 20557 GAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGG 20498 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || ||||| || |||| |||||||| || |||| || || || Sbjct 20497 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCG 20438 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || |||||||||||||| ||||| || ||||||||||| ||||||||| Sbjct 20437 ACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 Score = 143 bits (158), Expect = 6e-29 Identities = 171/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| ||||| |||| ||| || || ||||| || ||||| | Sbjct 20387 TCCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 20328 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||||||||| ||||| || | || ||||| || || || |||||||| || || || Sbjct 20327 GAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGG---TCGGG 20271 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || || || || |||||||| |||| |||||||| || || | || ||| || Sbjct 20270 GGGAATACCCTCCTTGTCCTGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTC 20211 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || || ||||||||||| |||||||| Sbjct 20210 AACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGACGAAGATCTGCAT 20160 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||| | ||| || || ||||| || ||||||| Sbjct 20158 CCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20099 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| |||||||| || || Sbjct 20098 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGA 20039 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| || ||||| || || | ||| ||| || || Sbjct 20038 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACC 19979 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| ||||| ||||| |||||||| || || ||||||||| Sbjct 19978 TCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATT 19931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653855884408