Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3 122 9e-23 seq12 91.5 2e-13 seq1 82.4 8e-11 >seq3 Length=2330021 Score = 122 bits (134), Expect = 9e-23 Identities = 147/195 (75%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||| || || |||| || |||||||| || || || Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || || ||||||||||||| || | || |||||||||| ||| | || | |||| || Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGA-CG 20006 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | |||||| ||| || || |||| |||||||| ||||| || || ||||| Sbjct 20005 TTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTC 19946 Query 42195 ACAAAGATTTGCATT 42209 |||||||| |||||| Sbjct 19945 ACAAAGATCTGCATT 19931 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| || || || Sbjct 20351 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 20292 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||||| || | | |||||||||| ||| || || | ||| Sbjct 20291 AATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCA-CGT 20233 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || || | |||||| || || ||||| || ||||| | Sbjct 20232 TGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGA 20173 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 20172 CGAAGATCTGCAT 20160 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | || || || | || || |||||||| ||||| || Sbjct 20579 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAA 20520 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || |||||||||| ||| | || | | ||| Sbjct 20519 GATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTCACGT 20461 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || || || || | |||||| || ||||| || || ||||| | Sbjct 20460 TGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGA 20401 Query 42196 CAAAGATTTGCATT 42209 | ||||| |||||| Sbjct 20400 CGAAGATCTGCATT 20387 Score = 91.5 bits (100), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 |||| |||| || || || |||| || |||||||| |||||||| ||||| ||||||| Sbjct 19831 TGTAGTCAGAAAGCGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCT 19772 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG 42149 |||||| || | | ||||||||| ||| || |||| ||| | | | ||||| Sbjct 19771 GGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCT 19713 Query 42150 CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 ||| || || |||| |||||||| ||||| || || ||||| Sbjct 19712 GACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 19669 >seq12 Length=680385 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| |||||||| Sbjct 282009 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 281950 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 281949 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 281891 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAG 42187 | | | |||||| || || || || | |||||||| |||||||| || Sbjct 281890 TGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAG 281839 >seq1 Length=4053335 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | || || || |||| || |||||||| || ||||| Sbjct 1442472 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1442413 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||||| ||||||||||||| || | || |||||||||| ||| || Sbjct 1442412 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1442365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212555554240