Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 seq1 96.9 3e-15 seq12 84.2 2e-11 >seq3 Length=2330021 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | |||||| || || || |||||||| || | Sbjct 20159 ACCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 20100 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| |||||||||||||| ||| | || || ||||||||||||||||| Sbjct 20099 CAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGG 20040 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || | || || Sbjct 20039 AATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGAC 19980 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | |||||||||||| | ||| || || || || |||||| Sbjct 19979 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCATT 19931 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || || |||| |||||| || || || |||||||| || | | Sbjct 20386 CCACCACGCAGACGAAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 20327 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || |||||||| |||||| ||||||| |||||||||||||| ||| Sbjct 20326 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGA 20267 Query 64337 ATTCCTTCTTTTTCTTGTATTTT 64359 || || || || || || || || Sbjct 20266 ATACCCTCCTTGTCCTGGATCTT 20244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || || || || ||||||||||| || | || || || | || Sbjct 20600 AAGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATC 20541 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || |||||||| || ||| | || || ||||||||||| || ||||| || || || || Sbjct 20540 CTCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC 20481 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || || || || || | || | || Sbjct 20480 CTGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGT 20421 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||||||| | || || ||||| || |||||| Sbjct 20420 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCATT 20387 >seq1 Length=4053335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || |||||| |||| || |||||||||||| Sbjct 1442477 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1442418 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 || | ||||| |||||||||||||| ||||| || || || || || || || Sbjct 1442417 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 1442365 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/139 (73%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 115367 CACGGTTTTCATGTTCACGAATTCGGCGACA---CTAGCAACGGCTGCACGTCCGCCGGC 115423 |||||||| || |||||||| || || |||| || || | |||||| || ||||| Sbjct 1625560 CACGGTTTCCACGTTCACGAGTTTGGTGACATCTCTGGCGAGGGCTGCCTCGCCACCGGC 1625501 Query 115424 GAGCATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCACGTC 115483 | || | ||||||||| ||||| |||||||| || | | |||||||||| | Sbjct 1625500 GGCCACTACAACCCGTTCAACCAGACCCACGGCGCTCCCGAGGACAAGGTCCGCCACGCC 1625441 Query 115484 GGTGATCTGGGCAACGTCG 115502 || || ||||||||||||| Sbjct 1625440 GGAGACCTGGGCAACGTCG 1625422 >seq12 Length=680385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || || | ||||| || || || |||||||| || | Sbjct 282045 ACCACCGCGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 281986 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || ||||||||||| || | ||||| ||||||||||| || || Sbjct 281985 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGG 281926 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || || || || Sbjct 281925 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 281866 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCA 64421 || | ||| | ||||||||| |||| Sbjct 281865 CTCAAGAGTGATGGTCTTGCCCGTCA 281840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644575159840