Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 141 9e-29 seq3 114 1e-20 seq4 87.8 2e-12 >seq20 Length=206136 Score = 141 bits (156), Expect = 9e-29 Identities = 492/751 (66%), Gaps = 19/751 (3%) Strand=Plus/Plus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 ||||| |||||||||| || ||| |||||||| | || || |||||||| |||| | Sbjct 117765 AACGACAACGAGCGCTACTTCATCGAGCACGTGCTCGCCTTTTTCGCCGCGTCCGACGGT 117824 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 ||||| ||| |||||| ||||| | | | |||| | | | || ||| ||||| || Sbjct 117825 ATCGTCAACGAGAACCTCGTCGAGCGCTT-CTGCGGTGAGGTGCAGATCTCCGAGGC-CA 117882 Query 52205 ATACTTT-TATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGC 52263 | || || || || || | | || ||| | | ||| |||||| |||| || | Sbjct 117883 AGACGTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCC 117942 Query 52264 TCATTGAGCAGCTG-ATAAAAGATGA-GCACGAGCGCGACACGCTGCTGAATGCGTTCGA 52321 |||| || || || || || | || || ||| | ||| | | || |||| Sbjct 117943 TCATCGA-CACCTACATCCGTGACAATGCCCGC-CGCCAGTACCTGTTCCAGGCCATCGA 118000 Query 52322 GCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381 | | | || ||| | || ||||| | ||||| | |||||| | | || Sbjct 118001 GACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCTCTCCGCTGGATCTCGGAC--CAG 118058 Query 52382 CG--CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCC 52439 || | || | | ||||||| | | || ||||| ||||||||| | || || || Sbjct 118059 CGTTCGTCGTTCGGCGAGCGCCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCT 118118 Query 52440 GGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTC 52499 ||| ||||| ||||||| | | || | | || | |||||||| || || ||| Sbjct 118119 GGCTCGTTTGCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTC 118178 Query 52500 AGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTAC 52559 |||||| | || ||||||||||| || || ||||| |||||||| ||||| || | Sbjct 118179 TCGAACGAGCTCATCTCGCGCGACGAGGGTCTCCACACCGACTTTGCCTGCCTGCTCTTC 118238 Query 52560 AAG-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGC 52618 | | || || ||| | | | ||||||||| | || |||||||||| Sbjct 118239 ACGCACCTTCGCCGCCGCCC----GCACCCCGACACGATCAACAAGATCATCAAGGAGGC 118294 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 ||| || || ||||||| | || | || || || ||| ||| | |||||||| Sbjct 118295 GGTCAAGATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCGCTCATTGGCATGAA 118354 Query 52679 CGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGG 52738 ||| || ||||||| ||||||| |||||||| || || || || | || ||| | Sbjct 118355 CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTC-G 118413 Query 52739 GCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 ||| | | ||| || ||| | ||| || || || || ||| | | || ||||| Sbjct 118414 GCAACGACAAGGTCTGGAACTCGGCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCC 118473 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 |||||||| |||||||||||||| ||| || Sbjct 118474 AGGGCAAGGCCAACTTTTTCGAGTCGCGCGT 118504 >seq3 Length=2330021 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | |||||||| || |||||||||||| | Sbjct 20158 CCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20099 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||| || || || || | | |||| |||||||| ||||| ||||| Sbjct 20098 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGA 20039 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | ||| || | |||||||| |||||| | Sbjct 20038 ATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTG-TCGATGGTGTCGGACGACTCGA 19981 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || || || ||||| || ||||| |||||||| Sbjct 19980 CCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 19932 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||| || || || |||| | Sbjct 20353 GACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCA 20294 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| ||||| || || ||||| || ||||| ||| || || | Sbjct 20293 AAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCACG 20234 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||| ||||| | ||| | ||| ||||| || || || || Sbjct 20233 TTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTG 20174 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 20173 ACGAAGATCTGCAT 20160 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | ||||| ||||| || || || || | | Sbjct 20581 GACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCA 20522 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || ||||| ||||| || || || || || ||||| ||| | || | || | Sbjct 20521 AAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC-CTGAATCTTCGACTTCAC 20463 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||| | ||||| ||||| | ||| | ||| || || || || || | Sbjct 20462 GTTG-TCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCT 20404 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 20403 TGACGAAGATCTGCAT 20388 >seq4 Length=2308281 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 57300 GGCCTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTC 57359 || || ||||||||| | ||| |||||||| ||| |||| || ||||| | ||||| | Sbjct 1134617 GGTCTTGACGTTGCCGAGGTCACCGACGTGACGCTCGGCGTCGGTGGGACCTCCGTGGTT 1134676 Query 57360 GCTGCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAA 57419 | ||| |||||| || ||| ||| ||||| || |||||||||||| |||| || || Sbjct 1134677 CTTACCGTGGGGGTTGAAATGCGAGCCAGCCGAAGTACAGCCGTTGCTGTTGTCACCAAA 1134736 Query 57420 C 57420 | Sbjct 1134737 C 1134737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262176681920