Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq20 131 2e-25 seq3 129 6e-25 seq1 96.9 3e-15 seq14 84.2 2e-11 >seq20 Length=206136 Score = 131 bits (144), Expect = 2e-25 Identities = 287/429 (67%), Gaps = 11/429 (3%) Strand=Plus/Plus Query 47145 ATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTAC 47204 ||||||||||| |||||||||| |||||||||| ||| |||||| | || || | Sbjct 118083 ATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTTTGCGTCCATCTTCTGG 118142 Query 47205 ATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGAC 47264 | || | || | |||||||| ||||| || |||||||| |||||| | ||| Sbjct 118143 CTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCATCTCGCGCGAC 118202 Query 47265 GAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACA---ACACTAG-AGTCGATCAAAA 47320 || || || |||||| |||||||||| || || || || | | | || | Sbjct 118203 GAGGGTCTCCACACCGACTTTGCCTGCCTGCTCTTCACGCACCTTCGCCGCCGCCC---- 118258 Query 47321 GTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTT 47380 | || ||| ||| | | || | || || ||| |||||| |||||| Sbjct 118259 ---GCACCCCGACACGATCAACAAGATCATCAAGGAGGCGGTCAAGATTGAGCAGGAGTT 118315 Query 47381 TTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTA 47440 || ||||||| || |||| || | | || |||||||| || | ||| | |||| Sbjct 118316 CCTCACCGAGGCCCTCCCCGTCTCGCTCATTGGCATGAACGCCAAGCTCATGTGCCAGTA 118375 Query 47441 CATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACAC 47500 ||| || ||||||||||||||||| ||||| || | |||| | | || | Sbjct 118376 CATTGAGTTTGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGACAAGGTCTGGAACTC 118435 Query 47501 CGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGA 47560 | || || ||||| || ||| | | || |||||| |||||||| ||||||||||||| Sbjct 118436 GGCCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTTTTCGA 118495 Query 47561 GAAGCGCGT 47569 | |||||| Sbjct 118496 GTCGCGCGT 118504 >seq3 Length=2330021 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | ||| ||||| || || || ||||| ||| | Sbjct 20158 CCACCGCGGAGACGGAGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20099 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || || |||| | |||||||| |||||||| Sbjct 20098 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGA 20039 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| || ||| ||||| |||| |||| |||||| | |||||| Sbjct 20038 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTG-TCGATGGTGTCGGACGACTCGAC 19980 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| ||||| || ||||| |||||||| Sbjct 19979 CTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCAT 19932 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | ||| || ||| || ||||| |||||| Sbjct 20584 GTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCA 20525 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || ||||||||||||||| || ||| ||| Sbjct 20524 GCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTC 20465 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||||| |||||| || | || | ||| |||||||| || || Sbjct 20464 ACGTTG-TCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGT 20406 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 20405 CTTGACGAAGATCTGCAT 20388 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||||||| | || | |||||||| |||||||| || ||||||||| Sbjct 19808 TCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTG 19749 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| ||| ||||| |||| |||| |||||| | |||||| |||| ||| | Sbjct 19748 TCTTGGATCTTCGACTTGACGTTG-TCGATGGTGTCTGACGACTCGACCTCGAGGGTGAT 19690 Query 127078 CGTTTTGCCGGTCAGAGTTTT 127098 || |||||||| || || || Sbjct 19689 GGTCTTGCCGGTGAGGGTCTT 19669 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | |||||| || || ||||| ||||| Sbjct 20357 CGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCC 20298 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || | || | |||||||| ||||| || || |||||||||||| ||| ||| ||| Sbjct 20297 GGCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTT 20238 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| ||||||| ||| || || | || | ||| || || || || | Sbjct 20237 CACGTTG-TCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGG 20179 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 20178 TCTTGACGAAGATCTGCAT 20160 >seq1 Length=4053335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| || || ||||| || || Sbjct 1442477 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 1442418 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| ||| |||| Sbjct 1442417 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 1442358 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| |||||||| |||||| |||| || | || || ||||| || Sbjct 1442357 ACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTCTTACCGGTGAG 1442302 >seq14 Length=350055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 47061 GAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAA 47120 |||| ||| || || | | | ||||||||| ||||| ||||||||||| | ||| Sbjct 103165 GAGAACATCCCTTGTATTCAGAAAAAGGCCGACTGGGCGATGAAGTACAT---CACCGAC 103109 Query 47121 AACGTCACTCTGGCCGA-ACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTC 47179 | || || | | || |||| ||||||| ||||| ||| || || |||||||||| Sbjct 103108 GATGT-ACCTTTCCGGATACGTCTGATCGCCTTCGCTTGCGTTGAAGGTATCTTCTTCTC 103050 Query 47180 GGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTT 47239 || ||||| ||||| || | |||| | || | ||| ||| | ||||| Sbjct 103049 TGGATCGTTTGCTGCGATCTTCTGGTTGAAGAAGCGCGGTCTCATGGGCGGTTTGACGTT 102990 Query 47240 TAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCT 47293 |||||||| ||| ||||||| ||||| |||||| |||| |||||||| Sbjct 102989 CTCGAACGAGCTCATCAGTCGAGACGAGGGCCTACACACCGACTTCGCCTGTCT 102936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500586024640