Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 188 9e-43 seq20 138 1e-27 seq14 123 3e-23 seq1 84.2 3e-11 >seq3 Length=2330021 Score = 188 bits (208), Expect = 9e-43 Identities = 674/1046 (64%), Gaps = 27/1046 (3%) Strand=Plus/Minus Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307 || |||||||| ||||||||||| || | ||||| || | ||| || || || || || Sbjct 782218 TCGGCGAGACCCTGGACACCGAGACCGACGGGGCGGTGGCGCATGTTCGAGTTGCGCGC- 782160 Query 116308 GTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 116364 ||| ||||| || | || | | ||| ||| | || || |||||||||| Sbjct 782159 --CTCGGGGACGGGGTAGTAGTTGCGAGTGATGACCTGGTCAAGGTTGCGGGTGACAACC 782102 Query 116365 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 116424 || ||||| || || ||||| | | | || | | ||||| ||||| | Sbjct 782101 TTGGTGATCTCGTGGAGCTTCTTGAAGTCGTAGGTCTTGGTCTCGAAGTTGACGAAGGCG 782042 Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || || ||||| || || || || ||||| | ||| || | |||||| || Sbjct 782041 GGGAGAGCGATCGAGGCAAGGTTGCACACGGCAACCTCGTCAGGGGACGAGTACTCGATG 781982 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || ||| |||||||| | || || || || ||||| | Sbjct 781981 ATCTCAGTGCAGAGGTTCGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCGG 781922 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || |||||||||||||| | || || ||||| || || | || || || Sbjct 781921 TTGGCAGCGTCCTTGTAGAGCATGAAGGGACCACCGGTCTCGGTCTGAGCCTCAAGGATG 781862 Query 116605 GCCTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTC------CTCG 116658 || ||| | | ||| | | ||| ||| || |||| | |||| Sbjct 781861 GCGAACCAGAGCTTTTGGGC---CTTAATGGTCTTG---CGACCCTTACCGGCACGCTCG 781808 Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTA 116718 || | ||| || ||| ||||| || | || | ||| || || || | Sbjct 781807 TAGCTCTCGTACAGCTTCTCGAACTCCTCGGAGTGGACGTCGGCGAGGCCAGGGCACTCA 781748 Query 116719 TCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 116778 | || || | ||| | ||| | ||| | ||| || ||||||||||||||||| | | Sbjct 781747 GCCGGGCACATGAGGGTCCAGTCACCGTCAGACTCGACACGCTTCATGAAGAGGTCGGAG 781688 Query 116779 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 116838 |||||||| || ||||||| || || ||| | || || | || || || ||| Sbjct 781687 ATCCAGAGGGCGTAGAAGAGGTCACGGGCACGAACCTCCTCCTTTCCATGGTTCTTACGG 781628 Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898 | |||| ||||| | ||| || |||||||| || || ||||| | |||| | ||| Sbjct 781627 AGGTCCAGGAAGTCGAAGATGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCACCC 781568 Query 116899 TTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 ||| ||| |||||| || || | || || |||| | | |||||||| Sbjct 781567 GGGCGCTTGTTGCCACCCTGGTCAACGTAACGAGCGGTAGCGTCGTAGGCACGAAGCATG 781508 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGA 117013 |||| |||||| | ||| | ||| || || || || |||||| | ||||| | | Sbjct 781507 GGAACGATACCGTTAGAGTAGCCGTTGGTTCCGGCAATGTACGAGCC--CTTGGCACGAA 781450 Query 117014 CATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGA 117073 | ||||||||| | ||||||||| || || ||| ||||| || || || | ||| Sbjct 781449 TGTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCACAGGTCTTGA 781390 Query 117074 GACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACA 117133 || || ||||||| || || || ||||| |||| | |||| |||||||||| ||||| Sbjct 781389 GAGTGTCGTAGATACCGTCAATGGAGTCCTCCTTCATGGCGACGAGGAAGCAGGACGACA 781330 Query 117134 TTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT 117192 | || ||| | || || || | ||||||||| || || | |||||| |||| | Sbjct 781329 TCTG-GGCGTGGGGGGTGCCCGAGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGC 781271 Query 117193 TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATT 117252 | | ||| | ||||||||| | ||| |||||| || ||||| ||||| | Sbjct 781270 TCGCTCATGAGGTTGTAGGTCTCGATGACCTTCTCAATGTCATCACCGTGGATACCAACG 781211 Query 117253 GAGACCCGCATAAACATGTATTGGGG 117278 || || ||||| | ||||| ||||| Sbjct 781210 GAAACACGCATGAGCATGTGCTGGGG 781185 Score = 114 bits (126), Expect = 2e-20 Identities = 170/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 12872 CTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATT-TTCACGGGCAA 12930 ||| |||| ||||||||| ||||| ||||| | ||| || || || ||| || | Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCGT 337548 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | | |||| ||| ||||| | | || ||||||||| ||||||||||||||||| | || Sbjct 337547 CG-CGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 12991 CGGCGGA-ACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGG 13049 |||| ||| || |||||| || |||| || ||||| | || ||||||||| Sbjct 337488 ATCCGGACACA-GAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 13050 GTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC 13105 ||||| ||||| || || || | ||| | ||||||||| || ||| |||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq20 Length=206136 Score = 138 bits (152), Expect = 1e-27 Identities = 305/447 (68%), Gaps = 14/447 (3%) Strand=Plus/Minus Query 127241 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAAT 127300 || ||| |||||| ||||| | ||| || | ||| ||| ||||||| || || || Sbjct 118504 ACGCGCGACTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAG 118445 Query 127301 GGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGA 127358 ||||| |||||||| | |||| | || | |||||| || || | || Sbjct 118444 GGGTTGGCCGAGTTCCAGACCTTGTCGTTGCCGAGGGCGAC--GAGGAGGCGGTCGGCGA 118387 Query 127359 CGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG-GTTACATGGGAGC 127417 | |||||||||||| |||| || | |||||| || ||||| | || ||||| Sbjct 118386 CAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCAATGAGCGAGACG-GGGAGG 118328 Query 127418 GCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTG 127477 || || || |||| ||| |||||| | || || ||| | ||| || || ||| Sbjct 118327 GCCTCGGTGAGGAACTCCTGCTCAATCTTGACCGCCTCCTTGATGATCTTGTTGATCGTG 118268 Query 127478 TCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCA--CAG-CAAACTCTTGGTG 127533 || || | ||| || || | ||||||| || ||| |||| || ||| Sbjct 118267 TCGGGGTGCGGGCGGCGGCG-AAGGTGCGTGAAGAG---CAGGCAGGCAAAGTCGGTGTG 118212 Query 127534 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCG 127593 |||||||||||| || |||||||| || ||||||||| ||||| ||||||||||| || Sbjct 118211 GAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGACCACG 118152 Query 127594 CTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGC 127653 |||||| | |||||| || | ||| ||||||||||||||||| ||||| || || Sbjct 118151 CTTCTTGAGCCAGAAGATGGACGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCAGC 118092 Query 127654 GAACGCAAATAGACGCTCGGCAAAGGA 127680 ||| || | || |||||| | || || Sbjct 118091 GAAAGCGATAAGGCGCTCGCCGAACGA 118065 >seq14 Length=350055 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 7/217 (3%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| || |||||||| || |||||| || |||||||| || ||| ||||||||| Sbjct 102953 GTGTAGGCCCTCGTCTCGACTGATGAGCTCGTTCGAGAACGTCAAACCGCCCATGAGACC 103012 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||||||||||||||| |||||| ||| || |||||||||||||| || || || || Sbjct 103013 GCGCTTCTTCAACCAGAAGATCGCAGCAAACGATCCAGAGAAGAAGATACCTTCAACGCA 103072 Query 127651 CGCGAACGCAAATAGACG-CTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATC 127708 ||||| || | ||||| || | ||| || || | || | |||||||| Sbjct 103073 AGCGAAGGCGATCAGACGTATCCGGAAA-----GGTACATCGTCGGTGATGTACTTCATC 103127 Query 127709 GCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCT 127745 ||||| | |||||||||| ||||| |||| | ||| Sbjct 103128 GCCCAGTCGGCCTTTTTCTGAATACAAGGGATGTTCT 103164 >seq1 Length=4053335 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/202 (70%), Gaps = 9/202 (4%) Strand=Plus/Minus Query 12871 GCTTACCGAC---GGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGG 12927 |||||||| | |||||| | |||||||||||||| || || || | || | Sbjct 271085 GCTTACCGCCCATGGCGTCGAGCTCGTCAATGAAAACAATGGCGGGAGCCTTGGCGCGCG 271026 Query 12928 CAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAAT 12987 || | | |||| || ||||| | ||||||||||||||| ||||||||||| | || Sbjct 271025 CAGCCTTGAAGAGCTCGCGCACGCGCTTGGCACCGACACCGACAAACATCTCGTCGAA-- 270968 Query 12988 TGGCGG---CGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGA 13044 ||| | ||||| || |||||| || | | || || |||||||| || |||| Sbjct 270967 -GGCAGATCCGGAAGCGAAGAAGAAGGGCACCTCCGCCTCGCCGGCGATGGCGCGCGCGA 270909 Query 13045 GGAGGGTCTTCCCCGTCCCTGG 13066 |||| ||||| || || || || Sbjct 270908 GGAGCGTCTTACCAGTACCCGG 270887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506923921760