Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 147 5e-30 seq1 129 1e-24 seq12 127 5e-24 >seq3 Length=2330021 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 20371 AGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 20312 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||||||||| || ||||||||||||||||| || ||| || || ||| Sbjct 20311 TCCAGCTGCTTTCCGGCAAAAATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCC 20252 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || |||| |||||||||| Sbjct 20251 TGGATCTTCGACTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTC 20192 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || || || || Sbjct 20191 TTACCCGTAAGGGTCTTGACGAAGATCTG 20163 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || ||||| ||||||||||| |||| ||||||||| | || || | || || Sbjct 20143 AGAACGAGATGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 20084 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| |||||||||||||| ||| ||| || || ||| Sbjct 20083 TCAAGCTGCTTGCCCGCAAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 20024 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 20023 TGAATCTTCGACTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 19964 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| |||||||| || || Sbjct 19963 TTGCCGGTGAGAGTCTTCACAAAGATCTG 19935 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || || |||||||| || | ||||||||| | | || | |||||| Sbjct 20599 AGGACGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCC 20540 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| || ||||| || ||||||||||| || ||| || || ||| Sbjct 20539 TCCAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 20480 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| |||| ||||| | | || || |||| |||||||||| Sbjct 20479 TGAATCTTCGACTTCACGTTGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTC 20420 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 20419 TTGCCGGTGAGGGTCTTGACGAAGATCTG 20391 Score = 87.8 bits (96), Expect = 4e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 199452 TGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCT 199511 ||||||||| | || | || || || ||||||||||| ||||| ||||||||||||| Sbjct 19831 TGTAGTCAGAAAGCGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCT 19772 Query 199512 GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTG 199571 |||| ||| || || || || || ||||| ||| ||| |||| |||||||| Sbjct 19771 GGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATGGTGTCTG 19712 Query 199572 TTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTT 199614 | || || || | ||||| ||||| || ||||| || || Sbjct 19711 ACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 19669 >seq1 Length=4053335 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 1442492 AGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1442433 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||||||||| || ||| || || ||| Sbjct 1442432 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 1442373 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | || || ||| Sbjct 1442372 TGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTAATGGTC 1442313 Query 199598 TTACCCGTGAG 199608 ||||| ||||| Sbjct 1442312 TTACCGGTGAG 1442302 >seq12 Length=680385 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||||||||||| ||||||||||| |||| ||||||||| | | || Sbjct 282038 CGAAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 281979 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||||||||||||||| || || || Sbjct 281978 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGGATACCC 281919 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 281918 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGA 281859 Query 199589 GTGATCGTCTTACCCGTGAG 199608 ||||| ||||| ||||| || Sbjct 281858 GTGATGGTCTTGCCCGTCAG 281839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921056222412