Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 140 4e-28 seq1 120 3e-22 seq12 118 1e-21 >seq3 Length=2330021 Score = 140 bits (154), Expect = 4e-28 Identities = 149/194 (77%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| || ||||||||||| || || Sbjct 20123 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCAAA 20064 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| |||||| ||||| ||| Sbjct 20063 GATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGA-CGT 20005 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || || | |||||||| ||||| || || || || | Sbjct 20004 TGTCGATGGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGAGTCTTCA 19945 Query 46581 CAAAGATTTGCATT 46594 ||||||| |||||| Sbjct 19944 CAAAGATCTGCATT 19931 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| || |||||||| ||||| || Sbjct 20351 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCAAA 20292 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | | |||||||||| ||||||| ||| | ||| Sbjct 20291 AATGAGACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCA-CGT 20233 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||| || || |||| |||||| || || ||||| || || || | Sbjct 20232 TGTCGATCGTGTCCGACGACTCAACCTCCAGCGTGATCGTCTTACCCGTAAGGGTCTTGA 20173 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 20172 CGAAGATCTGCAT 20160 Score = 109 bits (120), Expect = 6e-19 Identities = 142/194 (73%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || || || | || || |||||||| || || || Sbjct 20579 CTCCTTCTGAATGTTGTAGTCCGAGAGCGTACGTCCATCCTCCAGCTGCTTTCCAGCAAA 20520 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| |||||| ||| | ||| Sbjct 20519 GATCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTCA-CGT 20461 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || |||| |||||| || ||||| || || || || | Sbjct 20460 TGTCGATAGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCGGTGAGGGTCTTGA 20401 Query 46581 CAAAGATTTGCATT 46594 | ||||| |||||| Sbjct 20400 CGAAGATCTGCATT 20387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || || || || |||| || |||||||| || ||||| || | ||||||| Sbjct 19831 TGTAGTCAGAAAGCGTACGACCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCT 19772 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCG 46534 |||||| || | | ||||||||| ||||||| ||||| ||| | | | ||||| Sbjct 19771 GGTCGGGAGGGATACCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCGATGGTGTCT 19713 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 ||| || || || | |||||||| ||||| || || || ||| Sbjct 19712 GACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTA 19668 >seq1 Length=4053335 Score = 120 bits (132), Expect = 3e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 1442472 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 1442413 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 || | ||||||||||||| || | || |||||||||| ||||||| ||||| Sbjct 1442412 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGA 1442357 >seq12 Length=680385 Score = 118 bits (130), Expect = 1e-21 Identities = 131/172 (76%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 282009 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 281950 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | | |||||||||| |||||| ||||| ||| Sbjct 281949 GATGAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 281891 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAG 46572 | | | |||||| || || || || | |||||||| ||||||||||| Sbjct 281890 TGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTCAG 281839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238145642720