Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20 334 8e-87 seq3 138 1e-27 seq1 125 7e-24 seq12 116 4e-21 >seq20 Length=206136 Score = 334 bits (370), Expect = 8e-87 Identities = 577/826 (70%), Gaps = 23/826 (3%) Strand=Plus/Minus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | || || | | ||| || || ||||||||||| Sbjct 118496 CTCGAAAAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAAGGGGTTGGC 118437 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | ||| || |||| |||||| || ||||||| || | |||||| || ||||| Sbjct 118436 CGAGTTCCAGACCTTGTCGTTGCCGA---GGGCGACGAGGAGGCGGTCGGCGACAAACTC 118380 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | || || | | | || | || || || || || |||| Sbjct 118379 AATGTACTGGCACATGAGCTTGGCGTTCATG-CCAATGAGCGAGACGGGGAGGGCCTCGG 118321 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 |||| || ||||| || |||||| || ||| ||| | | | || | || | Sbjct 118320 TGAGGAACTCCTGCTCAATCTTGACCGCCTCCTTGATGATCTTGTTGAT-CGTGTCGGGG 118262 Query 132863 T-CGGCCGTTGCACCAAA--TGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | ||| || || | || ||| |||| | || ||| ||||||||| || | |||| Sbjct 118261 TGCGGGCG--GCGGCGAAGGTGCGTGAAGAGCAGGCAGGCAAAGTCGGTGTGGAGACCCT 118204 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | || ||||| ||||| ||| || | ||||||||||| || || || |||| Sbjct 118203 CGTCGCGCGAGATGAGCTCGTTCGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGA 118144 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| || || ||| || ||||||| |||||||||||| |||||||| | Sbjct 118143 GCCAGAAGATGGACGCAAACGAGCCAGAGAAGAAGATGCCCTCGACGGCAGCGAAAGCGA 118084 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 |||||||||||||||| | | | | ||||||||| || ||||| ||||||| Sbjct 118083 TAAGGCGCTCGCCGAACGACGAACGCTGGTCCGAGATCCAGCGGAGAGCCCAGTCGGCCT 118024 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAA--AC-GGAGTTTCTCTTCCG 133156 | | |||| ||| || || || |||||||| | |||| || || | | | Sbjct 118023 TCTTCTTGATGCAGGGAATGGTCTCGATGGCCTGGAACAGGTACTGGCGGCGGGCATT-- 117966 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 | ||| | |||||||||||||||| ||| ||| | |||||||| | ||||||||| Sbjct 117965 -GTCACGGATGTAGGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCA 117907 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCT 133276 ||| || |||||||| || | |||||| | |||||| || ||| |||| Sbjct 117906 TGATCTGGAAGCCGTAGAACGTCTTGGCCTCGGAGATCTGCACCTCACCGCAGAAGCGCT 117847 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 |||| || || ||||||||||| |||||| |||||||||||||| |||||||||| || Sbjct 117846 CGACGAGGTTCTCGTTGACGATACCGTCGGACGCGGCGAAAAAGGCGAGCACGTGCTCGA 117787 Query 133337 TGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||| | ||||||||||||||||| | ||||||||| | ||| | |||| Sbjct 117786 TGAAGTAGCGCTCGTTGTCGTTCAGCTTGTTGTCCCAGTCGTGGAGGTCAGGCGCGAGGT 117727 Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| ||||||| ||||| |||| || || |||||||| Sbjct 117726 TGATCTCCTCGGCGGTCCAGAACGAGGCCTGCGCCTTCTTGTACAT 117681 >seq3 Length=2330021 Score = 138 bits (152), Expect = 1e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || ||||| ||||| |||||||| |||| |||||| | | Sbjct 19931 AATGCAGATCTTTGTGAAGACTCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTC 19990 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||||| | | | |||| | || || || | ||||| ||||| ||||| |||||| Sbjct 19991 CGACACCATCGACAACG-TCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCCGACC 20049 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | |||||||| ||||| || |||| |||||||| |||||||| Sbjct 20050 AGCAGCGTCTTATCTTTGCGGGCAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACA 20109 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| ||||||| ||| | || || ||| Sbjct 20110 ACATCCAGAAGGAGTCGACGCTCCATCTCGTTCTCCGT 20147 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || ||||| | || || ||| | | Sbjct 20160 ATGCAGATCTTCGTCAAGACCCTTACGGGTAAGACGATCACGCTGGAGGTTGAGTCGTCG 20219 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| |||||| ||||||| Sbjct 20220 GACACGATCGACAACG-TGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCA 20278 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||||| || || || |||||||| |||| ||||| ||| |||||||| Sbjct 20279 GCAGCGTCTCATTTTTGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCGGACTACAA 20338 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| ||||||| || | || || ||| || | || || Sbjct 20339 CATCCAGAAGGAGTCGACGCTTCACCTCGTCCTTCGTCTGCGTGGTGG 20386 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||| ||||| || ||||| | || |||||| || | Sbjct 20387 AATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACGATCACGCTGGAGGTCGAGTCCTC 20446 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | || || || | ||||| ||||| |||||| | |||| Sbjct 20447 GGACACTATCGACAACG-TGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACC 20505 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || || || |||||||| || | || || ||| ||||||| Sbjct 20506 AGCAGCGCCTGATCTTTGCTGGAAAGCAGCTGGAGGATGGACGTACGCTCTCGGACTACA 20565 Query 38422 ACATCCAAAAGGA 38434 |||| || ||||| Sbjct 20566 ACATTCAGAAGGA 20578 >seq1 Length=4053335 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| || || ||||| || |||| |||||| || | |||| | | | |||| | || Sbjct 1442302 CTCACCGGTAAGACCATTACTCTCGAGGTCGAGTCCTCGGACACCATCGACAACG-TCAA 1442360 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| |||||| ||||||| ||||| ||||| | ||| || Sbjct 1442361 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCCGG 1442420 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| ||||||||| ||||||||||||||| ||||| |||| || Sbjct 1442421 CAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCT 1442480 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 1442481 CCACCTCGTCCTCCGT 1442496 >seq12 Length=680385 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 || |||||||| |||||||| | || |||||| || |||||| | | | |||| | || Sbjct 281839 CTGACGGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAA 281897 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || |||| ||||| ||||| || ||| | ||||| ||||| ||||| | ||| || Sbjct 281898 GTCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGTCTCATCTTCGCTGG 281957 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| |||||||||||||| ||||| |||| || Sbjct 281958 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCT 282017 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 282018 CCACCTTGTCCTCCGT 282033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172574922240