Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 150 2e-31 seq20 125 9e-24 seq14 98.7 1e-15 seq1 86.0 8e-12 >seq3 Length=2330021 Score = 150 bits (166), Expect = 2e-31 Identities = 357/534 (67%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || | | |||||||| || || || ||||| || Sbjct 781185 CCCCAGCACATGCTCATGCGTGTTTCCGTTGGTATCCACGGTGATGACATTGAGAAGGTC 781244 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || ||| | | | || |||| |||||| | || || ||||| Sbjct 781245 ATCGAGACCTACAACCTCATGAGCGAGCGCTAC-TTCACCCACGCCTCGCCGACGCTCTT 781303 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||| | || || || |||| ||||| || ||||| | || | |||||||| Sbjct 781304 CAACTCGGGCACCCCCCACGCCCAGATGTCGTCCTGCTTCCTCGTCGCCATGAAGGAGGA 781363 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || || | || || |||| |||||||| ||||| || ||||| ||| || || Sbjct 781364 CTCCATTGACGGTATCTACGACACTCTCAAGACCTGTGCTCAGATCTCGAAGACTGCCGG 781423 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 |||||| || | |||||||| | | | ||||| | |||||| || || || Sbjct 781424 TGGTATTGGTCTCCACATCCACAACATTCGTGCCAAG--GGCTCGTACATTGCCGGAACC 781481 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | ||||| |||| |||||||| | | |||| || || || || Sbjct 781482 AACGGCTACTCTAACGGTATCGTTCCCATGCTTCGTGCCTACGACGCTACCGCTCGTTAC 781541 Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 || |||| | ||| ||| ||| | |||| |||| || ||||| |||||| Sbjct 781542 GTTGACCAGGGTGGCAACAAGCGCCCGGGTGCCTTCGCCATCTACCTCGAGCCCTGGCAC 781601 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || ||| | || ||||| || | ||| ||||| || | ||||||| || | Sbjct 781602 GCCGACATCTTCGACTTCCTGGACCTCCGTAAGAACCATGGAAAGGAGGAGGTTCGTGCC 781661 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || || ||||||| ||| |||||||| | || |||||||||||| | || ||| Sbjct 781662 CGTGACCTCTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGTCGAG 781715 Score = 118 bits (130), Expect = 1e-21 Identities = 171/236 (72%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGA 16113 ||| || | ||| |||||||| || ||||||| |||||| || || ||| | || Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCGT 337548 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | | |||||||| || |||||| || || ||||| ||||||||||||||||| | | Sbjct 337547 CG-CGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 |||| || | || |||||| || || | || ||||| | || |||||| || Sbjct 337488 ATCCGGA-CACAGAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 ||||||||||| || || ||| | ||||| |||||| || ||||||||||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq20 Length=206136 Score = 125 bits (138), Expect = 9e-24 Identities = 121/153 (79%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 102180 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 102238 ||||| || |||| || || || ||||| |||||||||||||| || || |||| | Sbjct 118074 GAGCGCCTTATCGCTTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGCTCGTT-TGCGTC 118132 Query 102239 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 102298 || | |||||||||||||| ||||||||||| |||||| |||||| |||||||| || Sbjct 118133 CATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCGAACGAGCTCAT 118192 Query 102299 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||| || |||||||| |||||| || ||||| Sbjct 118193 CTCGCGCGACGAGGGTCTCCACACCGACTTTGC 118225 >seq14 Length=350055 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/210 (72%), Gaps = 9/210 (4%) Strand=Plus/Minus Query 102114 CCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGC-GTTC 102172 || |||||||| || || || || ||||| ||||||| | || | || || | Sbjct 103156 CCTTGTATTCAGAAAAAGGCCGACTGGGCGATGAAGTACAT-----CACCGACGATGTAC 103102 Query 102173 CTTTGCTGAG-CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| | || || || |||| || || || ||||| ||||||||||||||||| || | Sbjct 103101 CTTTCCGGATACGTCTGATCGCCTTCGCTTGCGTTGAAGGTATCTTCTTCTCTGGATCGT 103042 Query 102232 TCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 | ||| || || | ||| | |||||||| ||||||||| ||| | ||||| ||| Sbjct 103041 T-TGCTGCGATCTTCTGGTTGAAGAAGCGCGGTCTCATGGGCGGTTTGACGTTCTCGAAC 102983 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||| ||| ||| |||||||| || ||| Sbjct 102982 GAGCTCATCAGTCGAGACGAGGGCCTACAC 102953 >seq1 Length=4053335 Score = 86.0 bits (94), Expect = 8e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 |||| ||| || | ||| |||||||| || ||| || || |||| || | | Sbjct 271077 CCCATGGCGTCGAGCTCGTCAATGAAAACAATGGCGGGAGCCTTGGCGCGCGCAGCCTTG 271018 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 ||||| || || || |||||||| || ||||| ||||||||||| | ||| | || Sbjct 271017 AAGAGCTCGCGCACGCGCTTGGCACCGACACCGACAAACATCTCGTCGAAGGCAGATCCG 270958 Query 16179 GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 16238 ||| || |||||| || | | || || || ||||| || ||||| || |||||| Sbjct 270957 GAAGCGAAGAAGAAGGGCACCTCCGCCTCGCCGGCGATGGCGCGCGCGAGGAGCGTCTTA 270898 Query 16239 CCCGTACCTGGCTTACCCGCGAGGAGG 16265 || ||||| ||| || | ||||||| Sbjct 270897 CCAGTACCCGGCGGGCCGGTGAGGAGG 270871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742120665920