Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichosporon_20asahii_20[genbank_20GCA_5F001972365.1_202016-12-09] 36 sequences; 24,687,929 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 145 9e-30 seq20 136 5e-27 >seq3 Length=2330021 Score = 145 bits (160), Expect = 9e-30 Identities = 355/536 (66%), Gaps = 13/536 (2%) Strand=Plus/Minus Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 106842 ||| || ||||||||||| ||||| | ||||| |||| | ||||| || | || Sbjct 781715 CTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAAGAGGTCACGGGCACG 781656 Query 106843 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 106902 | |||| || | || ||||| || | || ||||| || | ||| || |||||||| Sbjct 781655 AACCTCCTCCTTTCCATGGTTCTTACGGAGGTCCAGGAAGTCGAAGATGTCGGCGTGCCA 781596 Query 106903 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 106956 ||||| || |||| |||| | ||| | ||| ||| | || | || || Sbjct 781595 GGGCTCGAGGTAGATGGCGAAGGCACCCG---GGCGCTTGTTGCCACCCTGGTCAACGTA 781539 Query 106957 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 107016 || || || |||| | | |||||||| |||| ||||| | || | || || || Sbjct 781538 ACGAGCGGTAGCGTCGTAGGCACGAAGCATGGGAACGATACCGTTAGAGTAGCCGTTGGT 781479 Query 107017 CCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCA 107074 || ||| ||||| | |||| | | | |||||||| | |||||||| || Sbjct 781478 TCCGGCAATGTACGAGCCCT--TGGCACGAATGTTGTGGATGTGGAGACCAATACCACCG 781421 Query 107075 GCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCC 107134 || ||| ||||| || ||||| | | ||||| | |||||||||| || |||||| Sbjct 781420 GCAGTCTTCGAGATCTGAGCACAGGTCTTGAGAGTGTCGTAGATACCGTCAATGGAGTCC 781361 Query 107135 TCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAG 107194 ||||| |||||| |||||||| |||||||| | || || || | |||||| Sbjct 781360 TCCTTCATGGCGACGAGGAAGCAGGACGACATCTGGGCGTGGGGGGTGCCCGAGTTGAAG 781301 Query 107195 AGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACA 107254 || || || | ||||| |||| | | | ||| || ||| ||||| | ||| Sbjct 781300 AGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGCTCATGAGGTTGTAGGTCTCGATGACC 781241 Query 107255 GAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 |||||||| || |||||||| || | || |||||||| | ||||| ||||| Sbjct 781240 TTCTCAATGTCATCACCGTGGATACCAACGGAAACACGCATGAGCATGTGCTGGGG 781185 Score = 105 bits (116), Expect = 8e-18 Identities = 168/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATT-TTCGCGGGCGA 9420 ||| || | ||| |||||||| || ||||||| || || || || ||| || || Sbjct 337607 CTTGCCGATGGCGTCAATCTCGTCGATGAAGATGATGCAGGGGGCGTTCTTCTTGGCCG- 337549 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 | | ||||||||||| || | || || ||||| ||||||||||||||||| | | Sbjct 337548 TCGCGAAGAGATCGCGCACACGCGAGGGACCGACACCGACAAACATCTCCACAAACTCGG 337489 Query 9481 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 |||| || | || |||||| || || | || ||||| | || |||||| || Sbjct 337488 ATCCGGA-CACAGAGAGGAAGGGAACCTTGGCCTCGCCCGCCGTCGCCTTGGCGAGGAGC 337430 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 ||||||||||| || || ||| | ||||| |||||| || ||||||||||| || Sbjct 337429 GTCTTACCCGTTCCCGGGGGACCGGAGAGGATGGCACCACGGGGAATCTTGGCTCC 337374 >seq20 Length=206136 Score = 136 bits (150), Expect = 5e-27 Identities = 240/342 (70%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 117096 GAGGAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGAT 117155 |||||| || || | ||| |||||||||||| | |||| || | |||||| || || Sbjct 118403 GAGGAGGCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCAAT 118344 Query 117156 GAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCAC 117215 ||| ||||| || || || |||| | | |||||||| |||||||| || | Sbjct 118343 GAGCGAGACGGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATCTTGACCGCCTCCTTGAT 118284 Query 117216 GATGGCGTGGATAGTTTCGGTAGTG-GGTCTATTACGCAAAGT-CTTGAAGAGCTCCACG 117273 ||| || ||| || |||| ||| || | || || || | |||||||| | Sbjct 118283 GATCTTGTTGATCGTGTCGGG-GTGCGGGCGGCGGCG-AAGGTGCGTGAAGAGCAGGCAG 118226 Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || |||||||||||| || || || || || || || |||||| || || Sbjct 118225 GCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAGGTGAGACCG 118166 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | |||| || || || ||||||||||| Sbjct 118165 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCA-AACGAGCCAGAGAAGAAGAT 118107 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 ||||| || || || || | |||||||||| |||| || Sbjct 118106 GCCCTCGACGGCAGCGAAAGCGATAAGGCGCTCGCCGAACGA 118065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980534508640